Gene PXO_00007 details

Gene Information

• Locus tag: PXO_00007
• Symbol: cyoC
• ID: 6305058
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1545495
• End bp: 1546127
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642638831
• Product: cytOchrome o ubiquinol oxidase, subunit III
• Protein accession: YP_001912707
• Protein GI: 188575778
• COG category: [C] Energy production and conversion
• COG ID: [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3
• TIGRFAM ID: [TIGR02842] cytochrome o ubiquinol oxidase, subunit III

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCATGG CTTTTTCGAC CACGCTTGAC CACGCCGCCC ATGCGGGCGG CCATGATCAC 
GACCACGAAC ATCACGACGG CGGCGGCAAT ACCGTCTTCG GGTTCTGGGT CTATCTGATG 
AGCGACTGCC TGCTGTTTGC CGGTCTGTTC GCCACCTATG CGGTGCTGTC CGGCGCCACG 
GTGGACGGGC CGACCGCCAA GGAGCTGTTC GACCTGAAGT TCGTGCTGGT GGAAACCTTC 
CTGCTGTTGT TCAGCAGCTT GAGCTTCGGC TTCGCGATGA TTGCCGCGCA CAAGCGCAAG 
ATGGGTGGGC TGTACGGCTG GATGGCGGTC ACCGCGCTGC TGGGTATCGG CTTCCTGTGC 
ATGGAAATCT GGGAGTTCAA CCACCTGATC CATGAAGGTG CCGGACCGGG TCGCAGCGCG 
TTCCTGTCGG CGTTCTTCAC CCTGGTGGGC ACGCATGGTC TGCACGTGGC CTCCGGCCTG 
TTGTGGATGG CGGTGCTGGT GATTCAGATC TCCAAGAACG GTCTGACCGC GCGCAACAGC 
ACGCGTCTGG CCTGCCTGAG CCTGTTCTGG CACTTCCTGG ACATCATCTG GATCGGTGTG 
TTCACCGTCG TCTATCTGCT GGGAGCGCTG TAA 

 

Protein sequence

MTMAFSTTLD HAAHAGGHDH DHEHHDGGGN TVFGFWVYLM SDCLLFAGLF ATYAVLSGAT 
VDGPTAKELF DLKFVLVETF LLLFSSLSFG FAMIAAHKRK MGGLYGWMAV TALLGIGFLC 
MEIWEFNHLI HEGAGPGRSA FLSAFFTLVG THGLHVASGL LWMAVLVIQI SKNGLTARNS 
TRLACLSLFW HFLDIIWIGV FTVVYLLGAL