| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00005 |
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| Symbol | |
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| ID | 6305060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1546629 |
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| End bp | 1548509 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642638833 |
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| Product | PDZ domain family protein |
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| Protein accession | YP_001912709 |
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| Protein GI | 188575780 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGC CCACCCTGTT GTCCGTGTCG TTGTTGGCGG CCTTGTCGCT GCCTGCGGCT
GCGCAAACCG CACCGCCGCA GGACGTGCCG TTCGACGGCA CCCTGAAGAT CGATGTGGAT
GCCACCGACC TGGCCCACCG CATCTTCAAG GTCAACATCA CCATGCCGGC CAAGCCAGGC
CCGATGACGC TGCTGTACCC GCAGTGGATT CCCGGCGATC ACTCGCCGAC CGGGCCGATC
GACAAGCTCG CCGGTCTGGT GATCAAGGTC GATGGCAAGG TCGTGCCCTG GAAGCGCGAC
CAATTCGACG TCTATGCGTT CAAGGTGGAC GTGCCGCAGG GCGCCACCGA GCTGACGGCC
GAGTTCAAGT TCCTCTCGCC GCAGGCCGGC AACCAGGGCC GGGTGATGAT GACCCCGGAA
ATGCTCAACC TGCAGTGGAA CACCACCGCG CTGTACCCTG CCGGCTATGT CGTGCGCAAC
ATCAAGGTGC AGGCCAGCGT CACCCTGCCT GCTGGTTGGA GCTATGCCAC CGCGCTGGAA
ACCGATCGCC GCGTCGGCGA CACGGTGAGC TTCAAGCCGA TCGATTTCGA CGACCTGGTC
GATTCGCCGA TGTTCGCCGG CAAGTACTAC AAGCGCGTGG AACTGAGCAC CGGCAAGCAG
CCGGTCTATC TCAATGTGTT CGCCGATGAA GCCAAATCGC TGGAGGCCAA GCCGGAGCAG
ATCAAGGCCC ATGCCGCGCT GGTGCAGCAG ATGGACAAGC TGTACGGTGC GCGCCACTTC
GACCATTACG AATTCCTGCT GGCGCTGACC AAGAAGCTGG GCGGCATCGG CCTGGAGCAT
CACCGTTCCA GCGAAAACAG CGGCCCGCCG AACTACTTCA CCGAGTGGGA CAAGAGCTGG
ACCATGCGCG ACCTGCTGGC GCATGAGTTC AATCACTCCT GGAACGGCAA GTACCGCCGT
GGCGCCGACC TGTCCACGCC GAACTTCAAC GTGCCGATGG GCGACAGCCT GCTGTGGCTG
TATGAGGGCC AGACCCAGTT CTGGGGCGAA GTGCTGGCTG CCCGTTCGGG CCTGTGGACG
CAGGACCAGG CGCGCGACAT GCTGGCTGGC GTCGCGGCGA CCTACGAGCG TGGTCGCCCC
GGCATGACTT GGCGCACGGT GCAGGACACC ACCAACGACC CGACCATGTC GATGCGGCGT
TCGAAGCCGT ACCGCAGCTA TCAGATGAGC GAGGACTACT ACTCCGGCGC CCAGATGATG
TGGCTGGAAG TGGATAGCAA GCTGCGCGCG CTCACCAACA ACAAGCGCTC CATCGACGAT
TTCGCCAAGG CGTTCTTTGG CATGAAGAAT GGCGATTGGG ATGTCAATCC TTACACCTTC
GATGACATCG TCAGCACGCT CAACGGCGTG GCTGCATACG ACTGGGCCAG CCTGTTGCGC
GAGCGCATGG ACGGGCACGG TTCCTTGAAT GGCGGTATCG AAGCCAACGG CTGGAAGCTG
GTCTACAACG ACGAGCCGAA CCTGGCCATC AAGACTTACG AGAGCAACAA GAACGACGTC
AGCCTGACCT ATTCGCTGGG CCTGTCGCTG GAAGGCTCGG GCGAGGTGAG TGAGGTGTTG
TGGGACAGCC CGGCGTTCAA TGCCGGCATC ATCAATGGCA ATAGCATCGT TGCGGTCAAC
GGCCGTGCCT TCAGCGCAGA CGTCATCAAG GATGCGATCA AGGCGGCCAA GGGCACCGCC
GCGCCGATCG AACTGCTGGT CAAGCGCGGC GACCGCTACG AAACCGTCCG CATCGACTAC
CACGGCGGTT TGTTGTATCC GCATCTGGAA CGCATCGCCG GCAAGCCGGA TCGCCTGGGC
GAGTTGTACA AGGCGCGCTG A
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| Protein sequence | MKMPTLLSVS LLAALSLPAA AQTAPPQDVP FDGTLKIDVD ATDLAHRIFK VNITMPAKPG
PMTLLYPQWI PGDHSPTGPI DKLAGLVIKV DGKVVPWKRD QFDVYAFKVD VPQGATELTA
EFKFLSPQAG NQGRVMMTPE MLNLQWNTTA LYPAGYVVRN IKVQASVTLP AGWSYATALE
TDRRVGDTVS FKPIDFDDLV DSPMFAGKYY KRVELSTGKQ PVYLNVFADE AKSLEAKPEQ
IKAHAALVQQ MDKLYGARHF DHYEFLLALT KKLGGIGLEH HRSSENSGPP NYFTEWDKSW
TMRDLLAHEF NHSWNGKYRR GADLSTPNFN VPMGDSLLWL YEGQTQFWGE VLAARSGLWT
QDQARDMLAG VAATYERGRP GMTWRTVQDT TNDPTMSMRR SKPYRSYQMS EDYYSGAQMM
WLEVDSKLRA LTNNKRSIDD FAKAFFGMKN GDWDVNPYTF DDIVSTLNGV AAYDWASLLR
ERMDGHGSLN GGIEANGWKL VYNDEPNLAI KTYESNKNDV SLTYSLGLSL EGSGEVSEVL
WDSPAFNAGI INGNSIVAVN GRAFSADVIK DAIKAAKGTA APIELLVKRG DRYETVRIDY
HGGLLYPHLE RIAGKPDRLG ELYKAR
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