| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00003 |
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| Symbol | |
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| ID | 6305062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1551004 |
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| End bp | 1552623 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642638835 |
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| Product | tetratricopeptide repeat domain protein |
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| Protein accession | YP_001912711 |
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| Protein GI | 188575782 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAAGA ATCCGGTTGA ACAACGCATT GCGCTGTTGC GCGATGAGTG GATGCAGGCC
AGCGACGACC CTGCGCTGCG GTTGTTTGTC TGGCGTGTGC CGGCCAACGC CTTGCGTCTG
CTGGCAGCGT TTTTCGAGGC ACAGAAGCAT CCGGGCGATT GGAACGTGCC CGACTATTTC
CTGCGCCTCG ATACTTCGTT CGACACCAGT TTCGGCTACA GCCGTGCGCT GAAGCTGGCA
CTGTCGGCCA GCTACCTCGG CAGCCAGAGC GAGCTGCGCG AGCAAGGTGT CGATCTTGGC
TGGCGTGTGC CCGGCCCGTC GCACGCCGAC ACCGCGGCGG GCGTGCAGGC GGTGTTCGAA
TCGTTTGCCA CGCATCATGC GGCGTACCTG CGCTACCTGG CAGTGGTCCT TGAACCTGAG
CGGGTGACGT CGCCAGAAGC GTTCATTGCC TGGGTCGATG CCGCGATGGC AGCGTCGACA
TCACCCGCGC TGCGGCTGGT TCTGGTGGAC ACCTATGAAG ATCCGCGCTG GCAGCCATTA
CTGGATCGGC ACGCCGCGCG CGCGCACCGT ATTGCGCCGC AGGTGGACAT GTTCGATATC
GGGCGCGAAA TTGCAGCGCA GTCGGGCGGT GCGGGGCCAG CGGTGGCGTA TCGCCAGTTG
TTGAGTGACC TCATGCTGGT GCTTGAGCGC GGCAGCGCTG CCCAGCTTGC CCAACGCATC
GAGCGCCCGA TGGCATTGGC ACAGCGGCAT GGCTGGAGCG ATCACCAGGT GGTGTTGAGC
ATGATGCTCG CTGGCGGCTG GTTGAAGGAG AAGCACTATC CTGCTGCCAT CAGCAGTTAT
CGTCAGGCGC GCGATCACGC AACACAGGCC CTGACCGGCG GGCATCCGGC CGCGCGCGAT
CTGTTGATGC AAGGCTGGTT CGGCGAGGCG GGGACGTGGT TTGCCGCAGG GCAGCCCGAC
CGTGCGGTTC AGGGGTATCT GTCTGCCGCG CAGACCGCTG CCGAGATTCC CAACCCGATG
TTCGTGATCG AGGCCTATCG CATGGCCGCG TTCTGTCTGG CGCAGGACGG CCAGCGCGAG
GCGGCGCGCA ACTACGGGCT GGAGGCCGTG CGCGCTGCCA AACCGCTGCG AAGCGAGGAT
CGCCGCTCCA CCACCTTGCC GCAAACCCTG CAGGACCTGC TTGTACTGCA AGACAAGCGG
CGCGCACACA GGATCGAGCA GTGTGCGGCG ACCTATCTGC AGTCGGTGAG CACGCTGCAC
GCGCAGGCCG AACAGCAGGC TGCACGACTG GGCGCGCAGC CTTCGTCGGC GCACCTGGAC
CAGATCGAAT CCACCCTGCA TGCTGGACTG GAACACGCGT TTCATCGAGC AGCCCAGGAA
CGCGAGCGTT TGATCCAGGG GGGCGACGAA TTCTTCCGCA AGGTGGTCGC GGTCGGCCGT
GAATTCCTGC ATTCCACCTG GAATGGCCTG CCGGATATTC GCCATCCGCT GGACAACGAG
ATTCCCGCCT GGACCCAACC GCCGGCGACC CAACCGCTTC CGGATCCCGC CGCACTGACC
CAATCTCCCG GCGCCGCACC ATCGGTGGGC CTGGCCGGAC GCACCGAGGC CACCGCATGA
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| Protein sequence | MSKNPVEQRI ALLRDEWMQA SDDPALRLFV WRVPANALRL LAAFFEAQKH PGDWNVPDYF
LRLDTSFDTS FGYSRALKLA LSASYLGSQS ELREQGVDLG WRVPGPSHAD TAAGVQAVFE
SFATHHAAYL RYLAVVLEPE RVTSPEAFIA WVDAAMAAST SPALRLVLVD TYEDPRWQPL
LDRHAARAHR IAPQVDMFDI GREIAAQSGG AGPAVAYRQL LSDLMLVLER GSAAQLAQRI
ERPMALAQRH GWSDHQVVLS MMLAGGWLKE KHYPAAISSY RQARDHATQA LTGGHPAARD
LLMQGWFGEA GTWFAAGQPD RAVQGYLSAA QTAAEIPNPM FVIEAYRMAA FCLAQDGQRE
AARNYGLEAV RAAKPLRSED RRSTTLPQTL QDLLVLQDKR RAHRIEQCAA TYLQSVSTLH
AQAEQQAARL GAQPSSAHLD QIESTLHAGL EHAFHRAAQE RERLIQGGDE FFRKVVAVGR
EFLHSTWNGL PDIRHPLDNE IPAWTQPPAT QPLPDPAALT QSPGAAPSVG LAGRTEATA
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