| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_5017 |
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| Symbol | |
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| ID | 6289953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010683 |
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| Strand | - |
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| Start bp | 64265 |
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| End bp | 64816 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642627411 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001901377 |
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| Protein GI | 187930891 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 0.260237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGCT CTGCATTCCT GCTCGTCATG GCGCTATTGC CGGCGCTGGC CTTTGCCGAC
TGTATTGACG AAGCCGCCAG GTTCCACCAG GTCGATGCGC GCTTGGTGCG CGCCATCGCC
CAGGTGGAGT CGCGGATGCA CGCGGACGCC GTTGGCGCCA ACAGCGATGG CAGTACCGAC
ATCGGTCTCA TGCAGATCAA CTCAAGCTGG CTACCCAGCC TGGCGCGCTA TGGCATCACC
CGAGCGCATC TGTTTGATGC TTGTGTCAAC GCCTACGTAG GAAGTTGGAT TCTGTCTCGC
AATATCCAGC AGCTCGGCCT CACGTGGGAT GCCGTCGGGG CCTACAACGC CAAGAGCCCG
GCAAAGCGTC TCGCCTACGC GCAAAAGGTC TATCAGGCGT TGGCGACGGC CAGCTCTACG
CCGAGCCGCG CAATTGCCAA CCCAGTAGCC TCAGTACGGC CTGTGGAGGC GCCGCGTGCT
GCTGCGCGCC GCCGGCAGAC GAACACGTCA TCGGACATCA CCATCGTCTC CTGGGAGCCA
CCCAATGAAT GA
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| Protein sequence | MKGSAFLLVM ALLPALAFAD CIDEAARFHQ VDARLVRAIA QVESRMHADA VGANSDGSTD
IGLMQINSSW LPSLARYGIT RAHLFDACVN AYVGSWILSR NIQQLGLTWD AVGAYNAKSP
AKRLAYAQKV YQALATASST PSRAIANPVA SVRPVEAPRA AARRRQTNTS SDITIVSWEP
PNE
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