Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4979 |
Symbol | |
ID | 6289924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010683 |
Strand | - |
Start bp | 27165 |
End bp | 28070 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642627374 |
Product | TniB family protein |
Protein accession | YP_001901340 |
Protein GI | 187930854 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00635243 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTAGCA CGACAGCCGA GTACAGTCAC CTCAGCCCGA AGGCGCAGGA ACAGCTGACC CTACCAGACA AGGATCGGAT TCGCCTGATC CAGGCTGGCA CGTGGCTCCC ACTCGATCAT GCAAAGACGA CGCTTCAGAA GTTGGAGGAC TTGCTCGACT ACCCAAAGGT AACGCGGATG CCGAGCTATC TCATCGTAGG TCCTTCATAC AGCGGAAAGA CTTCCATTCT TGAGCGTTTT CGCGATCAAC ACCTTCCCGA TTTGGATCCT GAGCAGGAGG TTACGCGGTG CCCGGTGGTG ATGGTCGATG CGCCGCCCAA GCCTGATCTG TCCGACTTCT ACAGCCGGAT CATGGATAGT CTGATGGCGC CGTACAAGCC GACGGCTCCG GTCTATGAAA AGTACTCGCA GGTCAAGCGT CTCTTTGGCG AGATGGATGT GCGCATCCTC ATCATCGATG AGATCCACCA TCTCATCGCC GGTGGCCTTA CCAAGCAACG CGAGTTTCGC AATGCCCTCA AAAGCCTGAG CAATGAAGCA AAGATCAGCA TCGTCGCCTC GGGGATTGAA GAGGCGTACA ACGCGTTCAA CGCTGATCCG CAGATGTCGA GTCGATTCGT ACCGATTGAG ATGCCTAGTT GGATACCAGG CAGGCAGTTG GGAACGTTGC TGAAGACCTT GGAGCACCGG ACGCCGTTGC GCCAACCGTC AGGGCTCCAT CGTCCGGAGA TGATGCAAGC GATCTACATG AAGAGCGAGT CCACCCTTGG TGACATCTTC GACCTCGTGA AGACTGCTGC AGTGGACGCC ATTCGGTCCG GGAAGGAGGC GATCACCGAA CTGCAGCTCA CCGAGTTGGA CTGGGTCCCA CCCTCCAAGC GCAGGACGTA CACACGACGG CTATGA
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Protein sequence | MTSTTAEYSH LSPKAQEQLT LPDKDRIRLI QAGTWLPLDH AKTTLQKLED LLDYPKVTRM PSYLIVGPSY SGKTSILERF RDQHLPDLDP EQEVTRCPVV MVDAPPKPDL SDFYSRIMDS LMAPYKPTAP VYEKYSQVKR LFGEMDVRIL IIDEIHHLIA GGLTKQREFR NALKSLSNEA KISIVASGIE EAYNAFNADP QMSSRFVPIE MPSWIPGRQL GTLLKTLEHR TPLRQPSGLH RPEMMQAIYM KSESTLGDIF DLVKTAAVDA IRSGKEAITE LQLTELDWVP PSKRRTYTRR L
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