Gene Rpic_4979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4979 
Symbol 
ID6289924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010683 
Strand
Start bp27165 
End bp28070 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content57% 
IMG OID642627374 
ProductTniB family protein 
Protein accessionYP_001901340 
Protein GI187930854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00635243 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTAGCA CGACAGCCGA GTACAGTCAC CTCAGCCCGA AGGCGCAGGA ACAGCTGACC 
CTACCAGACA AGGATCGGAT TCGCCTGATC CAGGCTGGCA CGTGGCTCCC ACTCGATCAT
GCAAAGACGA CGCTTCAGAA GTTGGAGGAC TTGCTCGACT ACCCAAAGGT AACGCGGATG
CCGAGCTATC TCATCGTAGG TCCTTCATAC AGCGGAAAGA CTTCCATTCT TGAGCGTTTT
CGCGATCAAC ACCTTCCCGA TTTGGATCCT GAGCAGGAGG TTACGCGGTG CCCGGTGGTG
ATGGTCGATG CGCCGCCCAA GCCTGATCTG TCCGACTTCT ACAGCCGGAT CATGGATAGT
CTGATGGCGC CGTACAAGCC GACGGCTCCG GTCTATGAAA AGTACTCGCA GGTCAAGCGT
CTCTTTGGCG AGATGGATGT GCGCATCCTC ATCATCGATG AGATCCACCA TCTCATCGCC
GGTGGCCTTA CCAAGCAACG CGAGTTTCGC AATGCCCTCA AAAGCCTGAG CAATGAAGCA
AAGATCAGCA TCGTCGCCTC GGGGATTGAA GAGGCGTACA ACGCGTTCAA CGCTGATCCG
CAGATGTCGA GTCGATTCGT ACCGATTGAG ATGCCTAGTT GGATACCAGG CAGGCAGTTG
GGAACGTTGC TGAAGACCTT GGAGCACCGG ACGCCGTTGC GCCAACCGTC AGGGCTCCAT
CGTCCGGAGA TGATGCAAGC GATCTACATG AAGAGCGAGT CCACCCTTGG TGACATCTTC
GACCTCGTGA AGACTGCTGC AGTGGACGCC ATTCGGTCCG GGAAGGAGGC GATCACCGAA
CTGCAGCTCA CCGAGTTGGA CTGGGTCCCA CCCTCCAAGC GCAGGACGTA CACACGACGG
CTATGA
 
Protein sequence
MTSTTAEYSH LSPKAQEQLT LPDKDRIRLI QAGTWLPLDH AKTTLQKLED LLDYPKVTRM 
PSYLIVGPSY SGKTSILERF RDQHLPDLDP EQEVTRCPVV MVDAPPKPDL SDFYSRIMDS
LMAPYKPTAP VYEKYSQVKR LFGEMDVRIL IIDEIHHLIA GGLTKQREFR NALKSLSNEA
KISIVASGIE EAYNAFNADP QMSSRFVPIE MPSWIPGRQL GTLLKTLEHR TPLRQPSGLH
RPEMMQAIYM KSESTLGDIF DLVKTAAVDA IRSGKEAITE LQLTELDWVP PSKRRTYTRR
L