Gene Rpic_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3712 
Symbol 
ID6287607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3891743 
End bp3893089 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content67% 
IMG OID642627296 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001901262 
Protein GI187930775 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCCA CTCTGTCTCT TGCCGCCCCG CTGCTGGACG CATCCAGTCT ACGCCGCCTC 
TTCTGGCTGC GATGGAGCCT GCTGGCCACC CAACTGGTCC TGATGCTGCT CGCGCCGCTG
GTATTTGGCG TGCAACTGCC GGTGGTGCCG CTGCTGAGCG TGATGGGCCT GCACGCGCTG
TTCAACCTGC TGACCGGGTG GCGGGTGCGG CGCAACCGGC CCGTGCAGCA TATCGAGATC
ACCGTTCAGC TACTGGTGGA CCTGACCGCG CTGTCCGCCC TGTTGTATTT CACCGGCGGC
GCGACCAACC CGTTCGTCTC GTTCTATCTG CCGGCGCTGG CGATCGCGGC GGCCATGCTG
CCGCTCGCTC ATGTGGTGGG CCTGACGCTG TACGCGCTGG CCGCCTACAG CATGATGCTC
GGCAACTACA TCCCGCTGAA GCTGGCGAAC CCGGCAGATG CGTTGGCGTA TCACCTGGCA
GGCATGTGGA TCGATTTCGT GGCAAGCAGC GCGATGATCG CCGGCTTTAC GGCGCGCCTG
TCGGCCGCAC TGCGCGAGAG TGAGGCGCAG CTCACCGAAG CGCGCGAGCG GCTGCTGCGC
GAGCAACGCA TCGAAGCCTT GATGTCGCAA GGCGCGAGCG TGGCGCACGA GATGGGCACG
CCGCTGTCTA CCGTGGCCGT CATCACCGGC GAGCTGCAGC ACGACGCGAA GCAGCCCGAT
TCACCGCTCG GCCCGTACCG TGAAGACTTG CGCGCCATCG AACAGCAACT CGAACTGTGC
CGCGCCGCAC TGGCGCGCCT GCAGCGCAAG CCCAACGACG GCGCACCCGA GCCGCTCGGC
CAATGGCTAC CGGATTTCAC GCAGACTTGG CAGCTGCGGC ATCCGGACAT CCGCCTCCAC
ACGGAGACGT CGCCTGCGGC ACAAGCGGTG GAGCTCGATG CGGTGAACGT CGGCCAGATC
CTCACGATCC TGCTGGACAA CGCCGCCCGC AGCCAGCATC ACGCTGGACG CGACCTGGTA
CCGCTGCTGC TGACCGCCAA GATCGACGCC AATCCGGATG TGCTCCGCGA TATGCCGCCG
CAGATCGTGC TGTCCATCGT CGATACGGGG TTGGGCTTGC CGGAAGACCT GAGGACCTCG
CTCGGCCGCA CGCCGGTGCC GAGCCGGCAT GGCGGTCACG GCATCGGGCT GTACCTGGCC
TCCACCACCG CGCGCCGCCT GGGTGGTACC GTGGTGCTAC GCCCGAATCC GCCGCAAGGC
GCCATTGCCG AACTCCGCCT GCCGGTTGGC GGTCCGATGG AACACGCCGC CGCCCCCATC
ATTGGCGCAC CCACCCTCTT CACATAA
 
Protein sequence
MLSTLSLAAP LLDASSLRRL FWLRWSLLAT QLVLMLLAPL VFGVQLPVVP LLSVMGLHAL 
FNLLTGWRVR RNRPVQHIEI TVQLLVDLTA LSALLYFTGG ATNPFVSFYL PALAIAAAML
PLAHVVGLTL YALAAYSMML GNYIPLKLAN PADALAYHLA GMWIDFVASS AMIAGFTARL
SAALRESEAQ LTEARERLLR EQRIEALMSQ GASVAHEMGT PLSTVAVITG ELQHDAKQPD
SPLGPYREDL RAIEQQLELC RAALARLQRK PNDGAPEPLG QWLPDFTQTW QLRHPDIRLH
TETSPAAQAV ELDAVNVGQI LTILLDNAAR SQHHAGRDLV PLLLTAKIDA NPDVLRDMPP
QIVLSIVDTG LGLPEDLRTS LGRTPVPSRH GGHGIGLYLA STTARRLGGT VVLRPNPPQG
AIAELRLPVG GPMEHAAAPI IGAPTLFT