Gene Rpic_3688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3688 
Symbol 
ID6289828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3867519 
End bp3868031 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content64% 
IMG OID642627272 
Productrod shape-determining protein MreD 
Protein accessionYP_001901238 
Protein GI187930751 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCGC CCCAATATCT GCTGCGCCCG GTCAACCCTG GCTTCATCGC TTTCAGCTTC 
GTGCTGGCGT TCCTGTTCAA CCTGATGCCG TGGGGCCACA TGCAGTGGAT TCCCGATCTG
GTGGCACTGG TGCTGGTGTT CTGGAACATC CATCAGCCGC GCCGCGTGGG CATGGTGGTG
GCTTTCCTGC TGGGCCTGTT GATGGACGTG CACGAAGCGC GCCTGCTTGG CGAACATGCG
ATGGCGTACA CGATGCTGTC GTACTTCGCG ATCACGATTC ACCGGCGCGT GCTGTGGTTC
ACGGTGCTGT CGCAGGCGCT GCATGTGCTG CCGCTGCTGG TGCTGGCGCA CGCCGTACCG
ATCGTCATCC GTCTGCTGAT GGGCGCGCAC CTGCCGGACT GGCAGGTCAT CCTGCCGCCG
CTGATCGAAG CCGCCCTGTG GCCGTTCGCC AACGCCTTCT TGCTGGCGCC GCAGCGTCGC
CCGGAGAGCG TCGACGAAAC CCGGCCCATC TAA
 
Protein sequence
MNSPQYLLRP VNPGFIAFSF VLAFLFNLMP WGHMQWIPDL VALVLVFWNI HQPRRVGMVV 
AFLLGLLMDV HEARLLGEHA MAYTMLSYFA ITIHRRVLWF TVLSQALHVL PLLVLAHAVP
IVIRLLMGAH LPDWQVILPP LIEAALWPFA NAFLLAPQRR PESVDETRPI