Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3675 |
Symbol | |
ID | 6288933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3849445 |
End bp | 3850305 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642627259 |
Product | M48 family peptidase |
Protein accession | YP_001901225 |
Protein GI | 187930738 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCAACT GGATCAAGAC CTTCATGTTG ATGGCAGCGA TCACCGCGCT GTTCATCGTC ATCGGCGGCA TGATCGGCGG ACGCAGCGGG ATGATGCTGG CGCTGCTGTT CGCGCTGGGC ATGAATTTCT TCTCGTACTG GTTCTCCGAC AAGATGGTCC TGCGCATGTA CAACGCGCAG GAAGTCAACG AGACCAGCGC GCCGCAGTTC TACCGCATGG TGCAGGAGCT TGCCGGCCGC GCCGGCCTGC CGATGCCGCG CGTCTACCTG ATCGACGAAG CCCAGCCCAA CGCCTTCGCC ACCGGCCGCA ACCCCGAGCA CGCCGCCGTG GCGGCCACGA CTGGCATCCT CAACATCCTG TCGGAGCGTG AACTGCGCGG CGTGATGGCC CATGAACTGG CACATGTGCA GCACCGCGAC ATCCTGATCT CGACCATCTC GGCCACCATG GCCGGCGCGA TTTCGGCGCT GGCGAACTTT GCCGTGTTCT TCGGCGGGCG CGACAGCGAA GGCCGTCCCG CCAACCCGAT CGCCGGGATT GCGGTGGCGA TCCTCGCGCC GCTGGCGGCC GCGATGATCC AGATGGCGAT TTCCCGCGCG CGTGAGTTCG AGGCCGATCG CGGGGGCGCG ACCATCAGCG GCGACCCGCA GGCGCTGGCC TCAGCGCTGG ACAAGATCCA CCGCTATGCG GCCGGCATTC CGTTTGCCGC CGCTGAAGCC CACCCGGCTA CCGCGCAGAT GATGATCATG AACCCGCTGC ACGGCGGGGG CCTGGCCAAC CTGTTCAGCA CGCACCCGGC CACGGAAGAG CGCATCGCGC GCCTGATGCA GATGGCGCAG ACGGGTCAAT ATCCGGCGTA A
|
Protein sequence | MFNWIKTFML MAAITALFIV IGGMIGGRSG MMLALLFALG MNFFSYWFSD KMVLRMYNAQ EVNETSAPQF YRMVQELAGR AGLPMPRVYL IDEAQPNAFA TGRNPEHAAV AATTGILNIL SERELRGVMA HELAHVQHRD ILISTISATM AGAISALANF AVFFGGRDSE GRPANPIAGI AVAILAPLAA AMIQMAISRA REFEADRGGA TISGDPQALA SALDKIHRYA AGIPFAAAEA HPATAQMMIM NPLHGGGLAN LFSTHPATEE RIARLMQMAQ TGQYPA
|
| |