| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3665 |
|---|
| Symbol | cca |
|---|
| ID | 6287402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 3837676 |
|---|
| End bp | 3838962 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642627248 |
|---|
| Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
|---|
| Protein accession | YP_001901215 |
|---|
| Protein GI | 187930728 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAC GCGCATCACA GACGGAAGCC ATCGTCGATC CAGCCACGCA CGGGCTGGAT
GTGTATGCCG TGGGCGGCGC CATTCGTGAC GCGCTGCTCG GGTTGCCGGT GCAGGACCGG
GACTACGTTG TGGTCGGGGC CACGCCCGAA GATATGGAGG CGCGTGGCTT CCGCGCCGTC
GGCAAGGATT TTCCGGTGTT CCTGCACCCG GCCACGCAAG CCGAATACGC GCTCGCCCGC
ACCGAGCGCA AGACGGCTGC CGGTTACAAG GGTTTTTCGG TCTACTACGC ACCGGACGTC
ACGCTCGAAG ACGACCTCAT CCGCCGCGAC CTGACCATCA ACGCGATGGC GCAGCGCGTG
GCGGAAGACG GCGCGCTGGT GGGCCCCGTC GTCGATCCGT ATGGAGGGCA GGCTGATCTG
GCCTCGCGCA CGTTCCGGCA TGTATCCGAT GCGTTCATGG AGGATCCGGT GCGCATCCTG
CGGCTGGCGC GGTTTGCTGC GCGCTTTGCC GATTTTCATG TCGCACCCGA AACCAACGCG
CTGATGCAGC GCATGGTGCA GGCCGGCGAA GTCGATGCGC TGGTGCCCGA GCGGGTGTGG
CAGGAAATTG CCCGAGGCCT GATGGAGGCG CATCCGCAGC GCATGTTTGC CGTGCTGCGT
GACTGCGGTG CGCTGGTGCG CCTGCTGCCC GAACTTGACC GGCTGTGGGG CGTGCCGCAG
CGCGCCGACT ACCACCCCGA AGTCGACACC GGCGTGCACA CCATGATGGT GATCGAAACC
GCTGCTGCGA TGGCGACGTC GCTGCCGGTA CGCTTTGCCG CGCTGGTGCA TGACCTCGGT
AAGGGCACCA CCCCCGACGA CATCTTGCCG CGCCACATCG GCCACGAAGG GCGCAGCGTG
CCGCTGATCG AAGCCGTCTG CCAGCGCCTG CGTGTGCCGA CAGAGTGCCG CGAGCTCGCC
CTGGTGGTGG CGCGCGAGCA CGGCAACATT CACCGCTGCG ATGGCTTTGA TGCGGCAGCG
CTGGTACGCC TGCTTGAGCG TTGCGACGCC CTGCGCAAGC CCGATCGTTT TCGTCAGGCC
CTGCAGGCGT GCGAGGCCGA TGCGCGCGGT CGTCTCGGGT TTGAAGACCG CAGCTATCCA
CAGACGGAGC GCCTGCTGCG CGCGCTGGCG GCTGCATCGT CGATCGATGC TGGCGCCGTC
GCAAAGCGCT ATGCCGACAA CCCGGCGCAC ATCAAGCAGG CCGTGCATCA GGCGCGCATC
GAGGCCGTTG CACAGGCCGG CGTCTAG
|
|---|
| Protein sequence | MTERASQTEA IVDPATHGLD VYAVGGAIRD ALLGLPVQDR DYVVVGATPE DMEARGFRAV
GKDFPVFLHP ATQAEYALAR TERKTAAGYK GFSVYYAPDV TLEDDLIRRD LTINAMAQRV
AEDGALVGPV VDPYGGQADL ASRTFRHVSD AFMEDPVRIL RLARFAARFA DFHVAPETNA
LMQRMVQAGE VDALVPERVW QEIARGLMEA HPQRMFAVLR DCGALVRLLP ELDRLWGVPQ
RADYHPEVDT GVHTMMVIET AAAMATSLPV RFAALVHDLG KGTTPDDILP RHIGHEGRSV
PLIEAVCQRL RVPTECRELA LVVAREHGNI HRCDGFDAAA LVRLLERCDA LRKPDRFRQA
LQACEADARG RLGFEDRSYP QTERLLRALA AASSIDAGAV AKRYADNPAH IKQAVHQARI
EAVAQAGV
|
|---|
| |