| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3592 |
|---|
| Symbol | |
|---|
| ID | 6287583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 3761031 |
|---|
| End bp | 3763847 |
|---|
| Gene Length | 2817 bp |
|---|
| Protein Length | 938 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642627176 |
|---|
| Product | osmosensitive K+ channel signal transduction histidine kinase |
|---|
| Protein accession | YP_001901143 |
|---|
| Protein GI | 187930656 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.10559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCCG ACCAGCGCCC GAACCCCGAC CAACTCCTAG CCGAACTCCA ATCCGGCCAA
GAGCAGTCCG CCCGCGGCAA ACTCCGCATC TATTTCGGCG CCTCGGCCGG CGTAGGCAAA
ACCTACGCGA TGCTGGCAGC AGCCAAGGCC GCTCGCGCAG CCGGCATCGA CGCCGTCATC
GGCCTGGTCG AAACCCACGG CCGCGCCGAA ACCGCCGCGC TGGTCGCCGA CCTCGAACAC
CTTCCCACCC GCCAGATCGA ATACAAGGGC CGTACGCTGC CTGAGTTCGA TCTGGATGCC
GCGCTGGCGC GAAAGCCCGC ACTCATCCTC GTCGATGAGC TTGCCCACTC CAACGTGGCG
GGCTCGCGCC ACCCCAAGCG CTGGCAGGAC ATTGAGGATT TGCTCGCCGC AGGCATCGAC
GTCTGGACCA CCGTCAACGT CCAGCATCTC GACAGCCTGA ACGAGGCCGT CGGCAGCATC
ACCGGCATCC GCGTGTGGGA AACCGTGCCG GATGCGGTGT TCGATGCGGC CAACGAAGTC
ATCCTCGTCG ACCTGCCCGC CGATGAACTG CTGCGCCGCC TGGCCGAGGG CAAGGTCTAC
ATGCCCGAGC AGGCGCAGCA TGCGGCGCGC AATTTCTTTC GCAAGGGCAA CCTCATCGCC
CTGCGCGAAC TCGCCCTGCG CCGCACCGCC GACCGCGTCG ACGATGACGT GCAGGCCTAT
CGCCGCGCGC GTCGCATTGA AAACGTCTGG CGCACGCGCG AGACCGTCGT TGCGTGCCTG
GACCCGCAGG GCGATGGTGA ACAGGTCATC CGCAGCGCCG CGCGTCTGGC CGCGCAACTG
GAATGCGACT GGCATGCGGT GGCGGTGGTG ATGCCGCATC TGCGTGCCGC CGATGCGCGC
ACCGAGCGTT TGCATGCCCT GCTCAAGCTG GCACAAGACG CCGGTGCCAA GGTGGAGACG
CTGGCCGGCA CCAACGCCGT CGAGGCAATC ACCGGTTATA TCCGCCGCCA CAACATCACC
AAGGCGGTGA TCGGGCGGCC GCCGGAGAAG CGCTGGCGAT CGGCGCGGGC CATCGTCGTT
GCGCTGCGGC TGGCGATCGG GCTGGAGCGC CGCCTGCCCA GCGGTGACTT TGCCGAAGCG
CTCGCACGAC ATTGCCCCGA GGTCGACGTG ATTCGCGCCG CGGCGGACCC GGCGCATATC
CAGCTCACGC CGCGCGCAGC AGAGGTCGGC CGTGCTGATG TGCGCAGCGA AGCCCAGCGC
GCGGCCGATG CGCAGGCCGG TTGGCTCAAG CCGTCTTACG TGGCCGCGTG CGTGTATGTG
GGCGTGGCGA CAGCGTTGTC CAGCCTCGTG CGGCCGGTGT TCGACCTGGC CAACATCGTC
ATGCTGTTCC TGGCGGCGGT GGTGGCGGTG GCGATGCGCC ATGGGCGGGG TCCGGCAGCG
CTGGCTTCGG TGCTGTCGGT GGCGCTGTTC GATTTCTTCT TCGTGCCGCC ACGTTTTTCC
TTTGCCGTGA GCGACGTACA GTACCTGCTG ACCTTTGGGG TGATGCTGGC GGTCGGCATG
CTGGTGGGCC AGTTGACGGC AGGCTTGCGT GAACAAGCGG AGGTAGCGGT GCAGCGCGAG
GCGGCGGCAC ATGCGCTGTA TGAGGCCGCA CGCGAGTTGT CCGCCGCACT CACGCTGGAC
CAGATCGTCA GCATCGGTGG GCGCTTCGTC AACGCGACGT TTGGCGGGCG CTGCGCGTTC
TTTTTCGTCG GGCTCGATGG GCGGCTGGGT GCGCCGCAAG TCGCCAAGCC CGAAGGCAGC
ACCGATGCAC CGTCCGGCAT GCCAAACCTG GACCGCGTGC TGGCCGATTG GACATACCAG
CACGGCCAGC CTGCCGGTAC GGGCACGCAC ACGCTGCCGT CGGGTTCGGT GCTGTATCTG
CCCTTGAAAG CGCCGATGGC CATTCGCGGT GTGCTGGCCG TGGAGCCCGA AACCTTCCAC
GTGCTCGCAC AACCCGACAA CCGCCGCCAG ATCGACGCCT GCGCCACGCT CGTCGCCATC
GCCATTGAGC GCGTGCATTA CGTGGAAGTG GCCCGCGACG CCTTGGTGCG GATTGAATCG
GAGCGGCTGC GCAATTCACT GCTGGCCGCC GTGTCGCACG ATTTGCGCAC ACCGCTCACG
GGCCTGGTGG GGATGGCCGA AACACTATTG CGCGCGCAGC CGCCCCTGCC CCCGCTGCAG
GCAGAAGCTG CGGCCGCCAT TGGGCAGCAG GCGCAGCGCA TGCGTACGAT GGTCACCAAC
CTGCTCGACA TGGCGCGCCT GCAGAACCAG GACGTCAAGC TGCGGCTGGA GTGGCAATCG
GTGGAGGAAC TCGTCGGCGC GGCGTTGCAG GCGAATCCAT TGCCCGATCA TCGTGTGGTC
GTGGATCACC TCGCAGCCCT GCCGCTCATC CGCTGCGACG GGCCGCTGAT GGAGCGCGTG
CTGTCGAATC TGTTGGAGAA CGCGGGCAAA TTTGCGCCGG CCGGCACCGA GGTGCGTATC
TCTGGCGAGA TTGTCCACGA CGAAGCACGC GGCAACGAAC TCCGCCTGCG TGTGCGCGAC
CACGGCCCCG GCGTGCCGGC GGGTTCGGTG CAGACCATCT TCGAGAAGTT CACGCGCGGC
GAGAAGGAAT CGGCCACCAC CGGCGTCGGC CTGGGCCTGG CCGTGTGCGA GGCCATCGTG
AGTGCACATC ACGGCCGCAT CTGGGTGGAG GCACCGGCTG ACGGCGGCGC GTGCTTCGTT
GTCGCCCTGC CCGCCGCCGA GCCGCCGCCT GTGGAAGACG CCGAGCCCAT CGCCTAG
|
|---|
| Protein sequence | MPADQRPNPD QLLAELQSGQ EQSARGKLRI YFGASAGVGK TYAMLAAAKA ARAAGIDAVI
GLVETHGRAE TAALVADLEH LPTRQIEYKG RTLPEFDLDA ALARKPALIL VDELAHSNVA
GSRHPKRWQD IEDLLAAGID VWTTVNVQHL DSLNEAVGSI TGIRVWETVP DAVFDAANEV
ILVDLPADEL LRRLAEGKVY MPEQAQHAAR NFFRKGNLIA LRELALRRTA DRVDDDVQAY
RRARRIENVW RTRETVVACL DPQGDGEQVI RSAARLAAQL ECDWHAVAVV MPHLRAADAR
TERLHALLKL AQDAGAKVET LAGTNAVEAI TGYIRRHNIT KAVIGRPPEK RWRSARAIVV
ALRLAIGLER RLPSGDFAEA LARHCPEVDV IRAAADPAHI QLTPRAAEVG RADVRSEAQR
AADAQAGWLK PSYVAACVYV GVATALSSLV RPVFDLANIV MLFLAAVVAV AMRHGRGPAA
LASVLSVALF DFFFVPPRFS FAVSDVQYLL TFGVMLAVGM LVGQLTAGLR EQAEVAVQRE
AAAHALYEAA RELSAALTLD QIVSIGGRFV NATFGGRCAF FFVGLDGRLG APQVAKPEGS
TDAPSGMPNL DRVLADWTYQ HGQPAGTGTH TLPSGSVLYL PLKAPMAIRG VLAVEPETFH
VLAQPDNRRQ IDACATLVAI AIERVHYVEV ARDALVRIES ERLRNSLLAA VSHDLRTPLT
GLVGMAETLL RAQPPLPPLQ AEAAAAIGQQ AQRMRTMVTN LLDMARLQNQ DVKLRLEWQS
VEELVGAALQ ANPLPDHRVV VDHLAALPLI RCDGPLMERV LSNLLENAGK FAPAGTEVRI
SGEIVHDEAR GNELRLRVRD HGPGVPAGSV QTIFEKFTRG EKESATTGVG LGLAVCEAIV
SAHHGRIWVE APADGGACFV VALPAAEPPP VEDAEPIA
|
|---|
| |