Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3545 |
Symbol | |
ID | 6287285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3714138 |
End bp | 3714857 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642627129 |
Product | OmpW family protein |
Protein accession | YP_001901096 |
Protein GI | 187930609 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.506265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTATA AAAAAGCACT GGCGGCTGCC GCCGGGATGA TCCTCGCCAC CGCCGCGCAC GCACAAGCTG CCGGCAGCAA CATCGTCAGC CTCGGCTGGT TCCGCGTGAT GCCGAATAGC TCGAGCGACC CGCTGGTGGT CAAGAGCATC GGCGGTATCC CGGTGAATCA GTCGCAGTCC GGCACGGGCG CCAAGATTCA GGAAGCCGAT ACCGTTGGTC TCGCCTTCAC GCATTTCTTT ACCGACAACG TTGCCGTTGA ACTGGTGGGT GGCATTCCGC CGCGCCACAA GATCGAAGGG ACGGGCGCGC TGTCGGGTTA CGGCGAAATC GGCTCGGCCA AGCAATGGAG CCCGGCCGTG CTGGCGAAGT GGTACTTCTT CAACGCCGAC ACCAAGTTCC GTCCGTACGT GGGTCTGGGC CTGAACTACA CCTGGTTCTC CGACGAGAAG ATCACGAACA GCGCCTTCCA GACGAAGCTG GCTGGCCCGG GCAGCAAGAG CAACGTGTCG ACCGACGGTT CGTTGAACCC GGTGCTGAAC GTGGGTGCTA CGTACGCCAT CACCAAGGAC TGGTTCGTTG GCCTGTCGGT GTCGTACCTG CCGCTCAAGA CCACGGCAAC GATCGACAGC ACTACGGCGA CCGGCGTCCA CGTCGTGAGC GAAGCGAAGA TCAAGATCAA CCCGGTCGTG ACCTTCCTGA ACGTCGGCTA CCGCTTCTAA
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Protein sequence | MAYKKALAAA AGMILATAAH AQAAGSNIVS LGWFRVMPNS SSDPLVVKSI GGIPVNQSQS GTGAKIQEAD TVGLAFTHFF TDNVAVELVG GIPPRHKIEG TGALSGYGEI GSAKQWSPAV LAKWYFFNAD TKFRPYVGLG LNYTWFSDEK ITNSAFQTKL AGPGSKSNVS TDGSLNPVLN VGATYAITKD WFVGLSVSYL PLKTTATIDS TTATGVHVVS EAKIKINPVV TFLNVGYRF
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