| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3523 |
|---|
| Symbol | |
|---|
| ID | 6286796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3693288 |
|---|
| End bp | 3695237 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642627108 |
|---|
| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
|---|
| Protein accession | YP_001901075 |
|---|
| Protein GI | 187930588 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
|---|
| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.00126549 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTATC CAATTGAATT CGATGTGATC GTGGTGGGCG GCGGACACGC CGGCACCGAG
GCCGCCCTGG CGGCGGCGCG CATGGGCTGC CAGACCCTGC TGCTGACGCA CAACATCGAG
ACCTTGGGGC AGATGAGCTG CAATCCGTCC ATCGGCGGCA TCGGCAAGGG TCACCTGGTC
AAGGAAGTGG ATGCGCTCGG CGGCGCCATG GCCATTGCGA CGGACGAGGG CGGGATCCAG
TTCCGTATCC TCAATTCCAG CAAGGGCCCG GCCGTGAGGG CGACTCGCGC GCAGGCAGAC
CGCGTGCTGT ACAAGGCGGC GATCCGTCAT CGCCTGGAAA ACCAGCCGAA CCTGATGCTG
TTCCAGCAGG CTGTGGAAGA CCTGGTGGTA GAAGGCGATC GCGTAATCGG GGCGGTGACG
CAGGTTGGCG TGCAGTTCCG TGCACGTGCT GTGGTACTGA CGGCCGGCAC GTTCCTCGAC
GGCAAGATCC ACGTCGGGCT AAACAACTAC ACCGGCGGTC GCGCGGGCGA CCCGGCTGCG
GTATCGCTGT CGGCGCGTCT GAAGGAATTG AAGCTGCCGC AAGGCCGCCT CAAAACCGGC
ACGCCGCCGC GCATTGACGG CCGCTCCATC GATTTTTCGG TGCTCGAAGA GCAGCCGGGT
GATCTCGATC CGGTGCCGGT GTTCTCGTTC ATGGGCCGCG CGGACATGCA TCCGCGTCAA
GTGCCGTGCT GGGTAACGCA CACCAACGAG CGCACGCACG ACATCATCCG CGCCGGGCTG
GACCGCTCCC CCATGTACAC GGGCGTGATC GAAGGGGTGG GGCCACGCTA CTGCCCTAGC
ATTGAAGACA AGATCCATCG CTTCGCCAGC AAGGACAGCC ACCAGATCTT CCTGGAACCG
GAGGGCTTGG CGACCAACGA GTTTTACCCG AACGGCGTGT CGACCAGCCT GCCGTTTGAT
GTGCAGCTCG ACCTGATCCA CTCAATGCGC GGGCTGGAGA ATGCCCACAT CCTGCGTCCC
GGTTACGCCA TCGAGTACGA CTACTTCGAC CCGCGCGGCC TCAAGGCCTC GCTGGAGTCG
AAGGCGATTT CCGGCCTGTT CTTCGCTGGC CAGATCAACG GGACGACCGG TTACGAAGAG
GCCGCGGCGC AAGGCCTGCT GGCGGGCATC AACGCCGGCC TGCAAGTGCA GGGCAAGGAT
GCCTGGACGC CGCGCCGCGA CCAGGCTTAT CTGGGCGTGC TCGTCGACGA CCTCATCACC
CGGGGCGTGA CCGAGCCGTA TCGCATGTTC ACCAGCCGGG CCGAGTTCCG CCTCAGCCTG
CGGGAAGACA ACGCCGACAT GCGCTTGACC GAAGTCGGCC GCACGCTGGG CGTGGTCGAC
GACGCTCGCT GGGATGCCTT CAACCGGAAG CGTGACGCTG TTTCACGTGA AACAGAGCGC
CTCAAGTCGA CTTGGGTGAA TCCGGCCACG CTTCCGTTGG AAGACGCTGA GCCGGTCCTG
GGCAAAGGCA TTGAGCGCGA GTACGCCTTG GCCGACTTGC TGCGCCGGCC TAACGTGACG
TACGAAACCC TTGTGGGCAT GCAGGGCGGC AAGTACGCGC TCGAATCGCC GTTGGCTGAA
GACCCGTTGC TGGCCGAGCA GATCCGCGAG CAGGTCGAGA TCGGCATCAA ATACCACGGC
TATATCGCCC GGCAAGCCGA TGAAGTGGAG CGCCTCGGTG CGAACGAGAA CACCCGTCTG
CCGGCCGATT TCGATTATTC GCAAGTGCGC GGTCTGTCGA TCGAGGTCCA GCAGAAGCTC
GCCAAGCACA AGCCCGAGAC CATCGGACAG GCTTCACGTA TCTCCGGCAT CACGCCGGCC
GCCGTGTCGC TGCTGCTCGT GCACCTCAAG AAGGGCGTGC TGCGTGGCCA AGTTGGCCCG
CGCGCCAGTT CAGAAGGCGA GGCCGCTTGA
|
|---|
| Protein sequence | MLYPIEFDVI VVGGGHAGTE AALAAARMGC QTLLLTHNIE TLGQMSCNPS IGGIGKGHLV
KEVDALGGAM AIATDEGGIQ FRILNSSKGP AVRATRAQAD RVLYKAAIRH RLENQPNLML
FQQAVEDLVV EGDRVIGAVT QVGVQFRARA VVLTAGTFLD GKIHVGLNNY TGGRAGDPAA
VSLSARLKEL KLPQGRLKTG TPPRIDGRSI DFSVLEEQPG DLDPVPVFSF MGRADMHPRQ
VPCWVTHTNE RTHDIIRAGL DRSPMYTGVI EGVGPRYCPS IEDKIHRFAS KDSHQIFLEP
EGLATNEFYP NGVSTSLPFD VQLDLIHSMR GLENAHILRP GYAIEYDYFD PRGLKASLES
KAISGLFFAG QINGTTGYEE AAAQGLLAGI NAGLQVQGKD AWTPRRDQAY LGVLVDDLIT
RGVTEPYRMF TSRAEFRLSL REDNADMRLT EVGRTLGVVD DARWDAFNRK RDAVSRETER
LKSTWVNPAT LPLEDAEPVL GKGIEREYAL ADLLRRPNVT YETLVGMQGG KYALESPLAE
DPLLAEQIRE QVEIGIKYHG YIARQADEVE RLGANENTRL PADFDYSQVR GLSIEVQQKL
AKHKPETIGQ ASRISGITPA AVSLLLVHLK KGVLRGQVGP RASSEGEAA
|
|---|
| |