Gene Rpic_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3519 
Symbol 
ID6288674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3689970 
End bp3690518 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content65% 
IMG OID642627104 
Producthypothetical protein 
Protein accessionYP_001901071 
Protein GI187930584 
COG category[C] Energy production and conversion 
COG ID[COG3312] F0F1-type ATP synthase, subunit I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.32738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000213039 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAGCCAA CCGACCGGCA ACGGCCCGAT TCTTACGCTT CGTTGAAAGC CGCCCGACCC 
ACGTCGGCGC AGGATCCGAA GCGCGACGGT TGGGACGATG AGGAGCAGGC GGAGCCGCCG
GTGCATGTGC TCTCGCATGA CGAAGCGGTC GCCCTGTTCG GCGAGCAGGC TCTGCAGGCC
TCGCGTATCA CGCCCTTTTC CATCGTGCTC GGCCAGGTGG CCATCACACT GTTGTGTGCG
CTCGGTTGGT ATGTCGGCAC TTGGTTCGCG GGAGCGGGCG CTGCGTCAGC CGCCGAGGCT
GGATTGTCGG CGCTGCTGGG CGGTGGCGTA TGCGTGGTGC CTTCGGCATG GTTCGCGATG
CGGCTGTCGA CGGCCAAGGG GTTCGAATCC ATCGCCCGTC TGGTAGTGGG CGAAGCGATC
AAGGTGCTTG GCACGGTCGC GCTGCTGGTG ATCGTGGTGG TGGTGTTCAA GGGCCTGCAT
TGGCCGCCCT TGCTGATCAC CCTGATCCTG GCGCTCAAGA TGTATTGGGT CGGTCTCGCG
CTGCGATAG
 
Protein sequence
MQPTDRQRPD SYASLKAARP TSAQDPKRDG WDDEEQAEPP VHVLSHDEAV ALFGEQALQA 
SRITPFSIVL GQVAITLLCA LGWYVGTWFA GAGAASAAEA GLSALLGGGV CVVPSAWFAM
RLSTAKGFES IARLVVGEAI KVLGTVALLV IVVVVFKGLH WPPLLITLIL ALKMYWVGLA
LR