Gene Rpic_3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3462 
Symbol 
ID6287705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3620822 
End bp3621640 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content68% 
IMG OID642627047 
Producttransport-associated 
Protein accessionYP_001901014 
Protein GI187930527 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT CGTCGCCTAC GTTTGCCCGT TTCCGTCGCA CGGTCACGCG CACCGCCGTG 
CTGGCCGCCC TGGCCGGCAT GACCGCAACG CAGTTGACCG CCTGCTTCCC GCTGTTTGCG
GGCGCCGTGG CCGGCGGCGT GGCGCTTGCG ACCGACCGGC GCCCAACCGC CACCCAGACC
ATCGACCGCG GCCTGCAGAT GGAAGCCGAG AACACGCTGA TCTCGCGCTA CGACGGCCGC
GCCCACGTGA ACGTGACGGT CTACAACCGC AAGGTCCTGC TGACCGGCGA AGCCGGCACT
GAGCAGACCA AGCAGGAGAT CGGCCAATAC GCGCAGAAGC TGCAGAACGC ACGTGAGGTC
GTCAACGAGA TCGTGGTGAC GCCGGAGTCG AGCACGTTCG GCTCGCGCAC CAATGACACG
TACATCACCA CCAAGGTGAA GAGCGTGCTG GCCGGCACGG AAGGCCTGCC CTGGAACTCC
ATCAAGGTGA CCACCGAAGC GCAGACCGTC TTCCTGCTGG GCGTGGTGAC CGAGGCCGAA
GGCAACCGCG CCACCGAAGC CGTGCGCACC GTGAGCGGCG TCAACAAGGT CGTGAAGGTG
TTCGACTACG TGACCGAAGA CGAGCGCAAG CGCCTGGACG CCAATGCCAC GTCGACCAAC
CCGTCGACCG CGCCCGACGC GTCGCAAGGC ACGCCAACCC GCACGCAGGG TACGCCGACG
GCCACGCAGG CACCGGCCCC GGTCACGTCG GCCGCGCCGG GCGTGACCGT GTCGCCCACC
ACCTCGCCCG CGCTGCCGCC GGGCAAGCAA CTGCCGTAA
 
Protein sequence
MKLSSPTFAR FRRTVTRTAV LAALAGMTAT QLTACFPLFA GAVAGGVALA TDRRPTATQT 
IDRGLQMEAE NTLISRYDGR AHVNVTVYNR KVLLTGEAGT EQTKQEIGQY AQKLQNAREV
VNEIVVTPES STFGSRTNDT YITTKVKSVL AGTEGLPWNS IKVTTEAQTV FLLGVVTEAE
GNRATEAVRT VSGVNKVVKV FDYVTEDERK RLDANATSTN PSTAPDASQG TPTRTQGTPT
ATQAPAPVTS AAPGVTVSPT TSPALPPGKQ LP