| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3417 |
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| Symbol | |
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| ID | 6288874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3583728 |
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| End bp | 3584426 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642627002 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_001900970 |
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| Protein GI | 187930483 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.901274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGGA CCGCGACCCG GCCGATCCGC GTGATCGTGC TCGATGACCA TGCGGTTGTC
CGCCATGGTC TGGCTGCGCG CCTGAAACAG GAGGCCGACA TCGAGGTTTC CGGCATGTTC
GCCTCGGGTC GCGAAATCGT GCAGGCACTC AAAGACAAAA GCCTTGAGGT GGATGTCCTG
CTGATGGACT ACTCGCTCGG ACCCACCGAG ATTGACGGGC TGAACCTGAT CCGCCTGATC
CGCGTGCGCT ATCCGGACTT GAAGATCCTG GTGGCGTCGG CGCATCACAA CATGGCGACG
GTGGGCATGG TCATGCATGC CGGCGCACGC GGTTTTGTCG GCAAGGAAGA GGATCTGTCG
GAATTGGTAC GCGCCATCCG CACGGTGGCC GCGGGCGGCA AGCGCCTGAA TGCCGCGCTG
GCTGCCGAGA TGGAGCGCGA TGCGCTTTCC GCCGATGCGC CCGCGCCCGT CACCAATGGC
ACCAAGCTGT CCGCCCTGAT CGACCGCTCC GAACTCAGCC CGCGCGAGCG CGAGGTACTG
CGCTGCTGCC TGGACGGCAT GTCGGTCACG GACATTGCCG AGAAATTTGC GCGCAGCATC
AAGACGATCA GCTCGCAAAA GCAATCGGCC TATCGCAAGC TGGGTATTCG CACCGATACC
GAGCTGTTCA AGATCAAGCA CGAGCTTGAG GGGCAGTGA
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| Protein sequence | MNWTATRPIR VIVLDDHAVV RHGLAARLKQ EADIEVSGMF ASGREIVQAL KDKSLEVDVL
LMDYSLGPTE IDGLNLIRLI RVRYPDLKIL VASAHHNMAT VGMVMHAGAR GFVGKEEDLS
ELVRAIRTVA AGGKRLNAAL AAEMERDALS ADAPAPVTNG TKLSALIDRS ELSPREREVL
RCCLDGMSVT DIAEKFARSI KTISSQKQSA YRKLGIRTDT ELFKIKHELE GQ
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