| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3394 |
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| Symbol | |
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| ID | 6287546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3552275 |
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| End bp | 3553018 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642626979 |
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| Product | putative general secretory pathway J transmembrane protein |
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| Protein accession | YP_001900947 |
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| Protein GI | 187930460 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTA ATCGTTCCGC GAACATCGGC ACGCGCGGCT TCACCCTGCT CGAACTGCTG
GTGGCGATCA CGCTGCTGGC CATTCTGGCC GTGATCGCCT GGCGCGGGCT CGACAGCATG
ACCCGCACGC ACGAGGCGCT GGCCCAACGC GATGAACGCA TCGAAGCACT CAAGACCGCC
TACGCCCAGT TCGATGCCGA TTGCACCCAA CTGGCCGATC CGAACACGCT GTCGCGCTCA
CCGGTGGAGG TGGACGCCAA CCGCGTGCTG ATGGTGCGCG ACCGACGCGG GGAGAGCGAT
AGCGGCCAGC CGCCCGCGTG GCAAGTGGTG CTCTACCGCA TCGTCGACGG CCGGCTCGAA
CGCCTCCAGA CTCAACCGAT CACCAACCGC GGCGACCTGC GCAATGCGAT GGACAACCTG
CGCCAGGGCG GTGTGGGTGC CGCGCGCTAC CTGCTCGCCG CCAACGTTGA CAGCATCAGC
GCCCGCGCCT GGATCGAACC CGGCGGCTGG ATGGACAGCA CGGGCGCGCT GTCGGCGGCA
CTGTTCCCGG CCGGCAGCAA CACCACCACC CTCACCGGCT TGCCGTCGGC TTCCACGCCC
AGCGCGTCGG CGCCCTCGGC CAACAGCCCC GGCGTGGTGG TGCCGGCCGC CTCGGTGCGC
GCGGTGGAAC TGGCATTGCT CGTGCGCATG ACGCCGCAGG GCGCGCCGCA GCGCTTCACG
CGCATCTGCA TGACGGGGCT TTGA
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| Protein sequence | MSSNRSANIG TRGFTLLELL VAITLLAILA VIAWRGLDSM TRTHEALAQR DERIEALKTA
YAQFDADCTQ LADPNTLSRS PVEVDANRVL MVRDRRGESD SGQPPAWQVV LYRIVDGRLE
RLQTQPITNR GDLRNAMDNL RQGGVGAARY LLAANVDSIS ARAWIEPGGW MDSTGALSAA
LFPAGSNTTT LTGLPSASTP SASAPSANSP GVVVPAASVR AVELALLVRM TPQGAPQRFT
RICMTGL
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