| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3388 |
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| Symbol | |
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| ID | 6288944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3547945 |
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| End bp | 3549051 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642626973 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001900941 |
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| Protein GI | 187930454 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCA CGCCTTGGGA AAACCCGATG GGCACCGCCG GCTTCGAGTT CATCGAATAC
GCCGCGCCGG ACCCCGTTGC CATGGGCAAG CTGTTCGAGA ACATGGGCTT TACCGCCATC
GCGAAACACC GTCACAAGAA CGTGACGCTA TACCGCCAGG GCGAAATCAA CTTCATCATC
AACGCCGAGC CGGATTCGTT CGCGCAGCGC TTTGCGCGCC TGCACGGCCC GTCGATCTGC
GCGATTGCGT TTCGCGTGCA GGACGCCGCG TTTGCCTACA AGCGTGCGCT GGAGCTGGGC
GCCTGGGGCT TCGACACCCA CAGCGGCCCG ATGGAGCTGA ACATTCCGGC CATCAAGGGC
ATCGGCGATT CGCTGATCTA CCTGGTGGAC CGCTGGACCG GCAAGAACGA CGCCAAGGCC
GGCGACATCG GCAACATCAG CATCTACGAC GTCGATTTCG TGCCCATCGC GGGCGCCAAT
CCGAACCCCA CCGGGCACGG CCTGACCTAC ATCGACCACC TGACGCACAA CGTCTACCGT
GGCCGGATGA AAGAATGGGC CGAGTTTTAC GAACGCTTCT TCAACTTCCG TGAAGTGCGC
TACTTCGACA TCGAAGGCCA GGTCACCGGT GTGAAGAGCA AGGCGATGAC GAGCCCGTGC
GGCAACATCC GCATCCCCAT CAACGAGGAA GGGACGGAGA AGGCTGGTCA GATCCAGGAG
TATCTGGACA TGTACCACGG CGAGGGCATC CAGCACATCG CACTCGGCTC GACCAACCTC
TTCAACACGG TGGACGCACT GCGCAGCAAC GGCATCAAGC TGCTCGACAC GATCGACACG
TATTACGAAC TGGTCGACAA GCGCATCCCC GGCCATGGCG AAGACGTGGC GGAACTGAAG
AAGCGCAAGA TCCTCGTCGA CGGCGCCCCG GGCGACCTGC TGCTGCAGAT CTTTTCGGAA
AACCAGCTGG GCCCGATCTT CTTCGAGTTC ATCCAGCGCA AGGGCAACCA AGGCTTTGGC
GAGGGCAACT TCAAGGCACT GTTCGAGTCC ATCGAACTCG ACCAGATGCG CCGCGGCGTG
CTCAAGGCCG ACGACCAGCC GGCCTGA
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| Protein sequence | MQFTPWENPM GTAGFEFIEY AAPDPVAMGK LFENMGFTAI AKHRHKNVTL YRQGEINFII
NAEPDSFAQR FARLHGPSIC AIAFRVQDAA FAYKRALELG AWGFDTHSGP MELNIPAIKG
IGDSLIYLVD RWTGKNDAKA GDIGNISIYD VDFVPIAGAN PNPTGHGLTY IDHLTHNVYR
GRMKEWAEFY ERFFNFREVR YFDIEGQVTG VKSKAMTSPC GNIRIPINEE GTEKAGQIQE
YLDMYHGEGI QHIALGSTNL FNTVDALRSN GIKLLDTIDT YYELVDKRIP GHGEDVAELK
KRKILVDGAP GDLLLQIFSE NQLGPIFFEF IQRKGNQGFG EGNFKALFES IELDQMRRGV
LKADDQPA
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