| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3372 |
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| Symbol | |
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| ID | 6287833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3532866 |
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| End bp | 3533996 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642626957 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001900925 |
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| Protein GI | 187930438 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT CTGCCATTCT GGTCGCAGTT GGCGCCCTGT TCGCAGGTTC TGCCTATGCC
CAATCGAGCG TGACGCTGTA CGGTATTGTC GATACCAGCA TTCACTACAT CAACAACGCC
AACCAAGCTG GCAACAGCGT GACCCAGATG GAAAGCGGTG CTGTGTCGAA CAGCCGCTGG
GGCCTGAAGG GCTCGGAAGA CCTGGGTGGC GGCAACAAGG CACTGTTCGT GCTGGAAAGC
GGCTTCAACT CCGACTCGGG CACGATGAGC AGCAAGGGTA CGCTGTTCAA CCGTCAATCG
TTCGTGGGTC TGTCGAACAA GGACCTGGGC ACCATCACCC TGGGCCGTCA ATACAACTTC
GGCTTCACGA CGGGCGGCAA CTTCGACCCG CTGGGCGTGG GTAACTACGA CGGCAATTCG
TGGATGTACT ACGGCCTGAC CGGTCTGCGT GAATCGAACA TGCTGAAGTA CGAAGGCAAG
TGGAACGGCC TGTCGGTCGG CCTGGCCTAC GGCTTTGGCG AAGTGCCGGG TGCTGCAAGC
CAGAACTCGT ACGTTGGCGG CACGGTGGCC TATGAATTCG GCCCGGCCTA CATCGGCGCA
TTCGCACAGC AGCACAAGGA TATTGCTGGC AACAAGCAAA CCGTTTGGGG TATCGGTGGT
AACTACACCA TCGCTGCAGC CAAGCTGTTC GCAGGCTACA TCGACAGCAG CGACGCCACG
GGTTGCGTGA ACAGCTCGGC TAACTGCGTC GGCGGCAGCG CCTTCGGCCT GAACATCTAC
GGCAACGCCA CCTCGGGCGC TGGCCTGACC CCGGGCGCCA CGAAGCGTCG TGACCACGTC
GGCATCCTGG GCGTGACGTA CAACATCACC CCGGCCCTGG CTCTGACGGG CGCGTTCTAC
TACGACAGCA TCAACAACGC TGCCCTGACC GCCGGCAACG ACGGCAAGCG CTACACCGGC
GTGCTGCTGG CCGAGTACGC CCTGTCCAAG CGCACGCAAG TGTATGGCAC GGTCGACTAC
AACAAGGTCA AGGACGCAGC TCTGCCGGAA CTGTCGGGTG GCGGCAACGC AACCGGCGTT
GGCAAGTCGA ACCAGACGAG CGTTGGCGTG GGTATCCGCC ACATCTTCTA A
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| Protein sequence | MKKSAILVAV GALFAGSAYA QSSVTLYGIV DTSIHYINNA NQAGNSVTQM ESGAVSNSRW
GLKGSEDLGG GNKALFVLES GFNSDSGTMS SKGTLFNRQS FVGLSNKDLG TITLGRQYNF
GFTTGGNFDP LGVGNYDGNS WMYYGLTGLR ESNMLKYEGK WNGLSVGLAY GFGEVPGAAS
QNSYVGGTVA YEFGPAYIGA FAQQHKDIAG NKQTVWGIGG NYTIAAAKLF AGYIDSSDAT
GCVNSSANCV GGSAFGLNIY GNATSGAGLT PGATKRRDHV GILGVTYNIT PALALTGAFY
YDSINNAALT AGNDGKRYTG VLLAEYALSK RTQVYGTVDY NKVKDAALPE LSGGGNATGV
GKSNQTSVGV GIRHIF
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