| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3358 |
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| Symbol | |
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| ID | 6286854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3514948 |
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| End bp | 3519258 |
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| Gene Length | 4311 bp |
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| Protein Length | 1436 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642626942 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001900911 |
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| Protein GI | 187930424 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.504651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGTT CCCTCTTCGC GGTTTCCGCC GTCGTCTGTG CGGCCATCCT CGTTTGGTGG
GGCGGGGACG GCGCACGGCA AGCCGATACC GGCGACGCTG GGCAGGGGCC GGTGTATCGA
TTAGCCCGCT TTCCGCCGAT GCTCATCGTG GGCGTCATCG GCAACGCGAT GATGCCGCTG
GAGGGCATTG AGGCGGACCG GCTCAGCGGT TTCTCCGGGG ATCTCCTCAT GCAACTGATC
CCGCACGATC AAGTGCGCGT GGTACCGCGC GTATTCGCAC GGCGCGACGA ACTGCTCAAG
GCAGCATGTC GCGGCGATGT CGACATCATC ATGAGCGTGG CGCCACGCTC CCAATACGAC
CACTGCCTGG AGTATTCGGC ACCGTATCTC GAACGCCCCA CAGCGGTGGT CGCGCGCACG
GAAAACGTCG AAATAGCGCA GAACCCGTTC GGCGCGGGCG TTCGCGTTGC GGTCGAGCAA
GGCTCTTCAC TGGAGGAGGA GCTGGCCCAT GAATATCCGA ACATCGCGCT GTTGAGCACG
CCCACAGCAG CCGACGCTTT GGACGCCGTG CTCGACAAGA CGGTCGACGT CTACGCTGGC
GTCACCTACC CGACACGGGA ATTGATAGCG CGGCCGCGCT ACCGGGAGCT ATCGATCGTG
CAGCTTGCAA ACCAGCAGGT CGATGCGCTC CATTTCGCCG CGCCCCGGGA TCGCGCGACG
CTGATTCGCC ATCTGGATCG CCATCTCGCG CAGTTGCCTG ACACCACGAT GAGCCAACTT
CGCGCGCGCT GGATCGCTCA GGGCGGTACG TCGACCGTGG CGCTGCAATT GTCGGACGAT
GAGCGCGCCA TGCTGGCATC GCTGCCCCCG TTGCGGTATG CAGCCGACCC GGATTACATG
CCGTACACAT TTGACGACAC TGGCGGCGGC CTGCTCGGCA TCTTCCCGGA GTACCAGAAT
TTCCTTTCGC GAACGCTGGG CCTGCAGTTC GAGCGCGTCC CCGTGCGTGA CTGGGCCGAC
GCGCTCGACA AGGCGGGCAA TGGCGAGGTC GACATCTTGC TCGGCATGTC AGATCAGGAT
GCTCGCCCAG CTGGATTTGC GCTCACGCAG CCCATCGATG CCACGCCGCT GGTTATCGTC
GGGCGCAACG ATGCGTTGAC TGTGGCGGCG TTGTCCGAGC TTTCCGGCAA GACTGTCGCA
CTGCCTGCCA GCGATACGCT GACCGCGATC TTGCGCCAAA ACGTGCCGAA AATCCGCCTC
GTGTCGGCGG GTTCGGTCGA CAACGCGCTG TCCATGGTGG CAAGCGGCAA AGCCGATTTC
ACCATTGTCA ATCTGCCGGT GGCCGACGCG TTGATCCGCC ACCATTTTCC GGGCGAACTG
AAGGTCACGG GCTCGGCCAA CACGGTCGAG AGCATCGGCG TGGGCGTGTC GGCAAGGTAC
GCCGCGCTGG TGCCGCTCAT CAACCGCGCG CTCTTCGCCA TGCCCGAAGG CGAGCAAGTA
AGCATCCGCA ACAAGTGGCT GTCGGTCAGC TATCAGCTCG GTCCTTCGGC GTCGGCCGTG
CTTGGCAAGT TTGGGCCGGT GGCCGCGCTG GTGCTGGCGG CACTGGTGGC GCTCTTCATC
AAGCAGATGC AGTTGCGCCG TGAAAATCAT CAGCGCCGCC GCGCTGAAGA AACCCTGGCC
CAACAACTGA GCTTTCAGCG CGCGCTGATG GAGGCCGTGC CGTTCCCGCT CGTCGCCAAA
GACGCCGCGC AGCGTTACGT TGCCGTGAAT GCTGCGTTCT GCAACATGTT TGGCCAACCA
CGCGCTTCTT TGCTGGGGCG CACGCCGCAG GAGCTCGGGC TGTATTCGGT CAGCAACACG
TCGCCGCTGT CCGACATCAA CCAGCGCGCT GCGCAGATCA GCGAAAGCAC GCGCGAAGAA
CTCATCATCG ACACGCCGGA CGGGCAATCG CGCAACGTGC TGTACTGGAT CGAGCCGTTC
CATCTGCCGG ACGGGCAACC CGCGGGCACC GTCGCCTCGC TGGTCGACAT CAGTGAGATC
CGCGAGGCGC AAGCGCGAGC CGAACGCCTT GAACAGCGCC TGCGCGAGGT CACCGAATCG
CTGCCCGCGC TGGTCTATCA GTTCGAGCTG CCACCGGGTC AGGTCCAGGG GCGCATCACC
TACGTCGCGG GCAAAGCGTA CGAGACGCTG GGCGTGCAGC CTCAGGATCT GCTGGACTAC
CTGTCGACCC CGGAGCTACT CATTCACGAA GACGACCGGC AGCGCATGCT CGACACGGTG
CTGGTCTCGG CGCAGCAGCT GACGCCCCTG GACCAGCAGT TTCGCCATGT CAGCGCAGAC
GGCGTGGTCC GCTGGCTTCA TGCGCGCTCG ATTCCGCACC GCGAGGCGGA CGGCCGCACG
GTCTGGAACG GCTACCTGAG CGACGTCACC GCAGAGCGCG AGCAGGCCGA CGCACTGGAA
GCGGCCAAGA ACGCGGCGGA ATCGGCATTG CATGCGAAAG ACCGCTTCCT GGCCATGATG
AGCCACGAAA TCCGCACGCC CATGAACGGC GTGCTGGGCC TGGTCGAACT GCTGCAGCAG
ACGAAGCTCG AGGGCGAGCA GAAGCAGATG GTCTCGCTGG TGCAGGATTC GGGGCGCGCG
TTGCTGCATA TCCTCGATGA CATCCTGGAC TACGCAAAGA TCGAGGCCGG TCGCTTGGAT
ATTTCTCCGG CGGCCACGGA CCTGCGCGAG GTCTTTGATG GCACGGTCGG CTTGCTGGCG
AGCCGCGCAC ACGAAAAATC GCTGGCGGTG CATGTGACTG TGGCTGCCGA CGTGCCGGCC
AGCGTCTCGG TCGACAGCAT TCGTCTACGC CAGATCCTGT TCAACCTGCT CTCGAACGCC
ATCAAGTTCA CCGACACCGG AAGCGTGCGC CTTTCAGCGG AATGCGCGCG CGTCACCGAC
GACACGGCGC ATCTCATCAT CTCCGTCACG GATACGGGCA TCGGGATCTC GCCGGCGGTA
CAGGCCACGC TGTTCGCGCC ATTCGTGCAG GCCGAGCGCT CGACCACGCG GCGCTACGGC
GGCACCGGCC TGGGCCTGGC CATCTCCCGC CAGCTCGCGG GTCTGATGGG CGGGAAGCTC
GTCATGGAAA GTGCCCAAGG GCAAGGCACC GCCGTGACGC TGGAACTGAC CGTGCCAATG
CTCAAGGCGC GGTATGCGCT GCCGCAACTG GAAGGCCGCA GCGTTGCCAT TACCGTGGAT
GACGCGGCCG TGCGGCACAG CCTCACGCAG CTGGCGGTCG CGGCCGGGCT CCGGCCTGTG
GTTGCTGCAG ACGCCGACAT CCTCCTGACC ACCACGGCGC CGGCACACGA GCACGCCATC
CGCATCACCT CCGAAGCCAG CTATGCCGAA CCGGGCAACG CGCTGAGCAT CAATCCGCTG
AACTGGCACG CTTTCGTGCA GGCGTGCGAG CACGCGCTGC GTCGAGCCGG GCACGCGCAC
GTGGCGAGCG TGGCGGCCCA CACACCGCCG GCCGCCGCGC CTTCAGAAGC GCCCGGTGCA
CATATCCTCG TGGCGGAAGA CCATCCGATC AACCGCGAAC TGATCGCCAA ACAACTCCGG
CTGCTGGGTT ATCGGGTCAC GCTGGCCGAA GATGGCGTGG TCGCGCTCGA ACGTCTGCAC
GAACACCGTT TCGACGCGTT GCTCACCGAT TGCCACATGC CGCGCATGGA CGGCTTCGAT
CTGGCGCGGC ATATCCGCCA CGAAGAAGGC GACGGCCCTC GCCTGCCGAT CATCGCCATC
ACGGCGACGA CGCTGGCCGA GGAGCACGCA CGCTGCCGCG CCGTCGGCAT GGACGCCAGC
CTGCTGAAGC CGACCACGCT CGCGACGCTG CAGGAAGCGC TGTCTGCGCT GTGCACCGGT
GACGTTCCCG CGGGCGCCGG CGGGGCCGCG GAGGAGCCGC CCACCCTCTC GCTCGACGAC
CTGCACGCCG CGCTCGGGAC GGACCCCGCA GCCATCGGTT TGGCGCAGGT CTTCCTCTCG
TCGCTGGCCG ATGACGCGCA GCGCCTCCAG CCGCTGCTGG ACGCGATGGA CCGTGCAGCG
CTGCGCCGTT GGGCCCATCG CACCGGTGGT GCCCTCGCGC TGTTGCACAA CCCGGGCGTG
GATGCCGTAG CGGAAGCGTT CCGCCATGCC GTGCATAACG GCAGTGCGAA CGACATCCGT
GCTGCCGGGG CGCGCACGAT GAGGCTTTTG ACGCATATCA ACGGACTACT CAGCGCCTTC
GGATCCCCCG CCGCCGACGT TGTGCACCGC ACGCAAGTGA CGGATTCATA A
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| Protein sequence | MRRSLFAVSA VVCAAILVWW GGDGARQADT GDAGQGPVYR LARFPPMLIV GVIGNAMMPL
EGIEADRLSG FSGDLLMQLI PHDQVRVVPR VFARRDELLK AACRGDVDII MSVAPRSQYD
HCLEYSAPYL ERPTAVVART ENVEIAQNPF GAGVRVAVEQ GSSLEEELAH EYPNIALLST
PTAADALDAV LDKTVDVYAG VTYPTRELIA RPRYRELSIV QLANQQVDAL HFAAPRDRAT
LIRHLDRHLA QLPDTTMSQL RARWIAQGGT STVALQLSDD ERAMLASLPP LRYAADPDYM
PYTFDDTGGG LLGIFPEYQN FLSRTLGLQF ERVPVRDWAD ALDKAGNGEV DILLGMSDQD
ARPAGFALTQ PIDATPLVIV GRNDALTVAA LSELSGKTVA LPASDTLTAI LRQNVPKIRL
VSAGSVDNAL SMVASGKADF TIVNLPVADA LIRHHFPGEL KVTGSANTVE SIGVGVSARY
AALVPLINRA LFAMPEGEQV SIRNKWLSVS YQLGPSASAV LGKFGPVAAL VLAALVALFI
KQMQLRRENH QRRRAEETLA QQLSFQRALM EAVPFPLVAK DAAQRYVAVN AAFCNMFGQP
RASLLGRTPQ ELGLYSVSNT SPLSDINQRA AQISESTREE LIIDTPDGQS RNVLYWIEPF
HLPDGQPAGT VASLVDISEI REAQARAERL EQRLREVTES LPALVYQFEL PPGQVQGRIT
YVAGKAYETL GVQPQDLLDY LSTPELLIHE DDRQRMLDTV LVSAQQLTPL DQQFRHVSAD
GVVRWLHARS IPHREADGRT VWNGYLSDVT AEREQADALE AAKNAAESAL HAKDRFLAMM
SHEIRTPMNG VLGLVELLQQ TKLEGEQKQM VSLVQDSGRA LLHILDDILD YAKIEAGRLD
ISPAATDLRE VFDGTVGLLA SRAHEKSLAV HVTVAADVPA SVSVDSIRLR QILFNLLSNA
IKFTDTGSVR LSAECARVTD DTAHLIISVT DTGIGISPAV QATLFAPFVQ AERSTTRRYG
GTGLGLAISR QLAGLMGGKL VMESAQGQGT AVTLELTVPM LKARYALPQL EGRSVAITVD
DAAVRHSLTQ LAVAAGLRPV VAADADILLT TTAPAHEHAI RITSEASYAE PGNALSINPL
NWHAFVQACE HALRRAGHAH VASVAAHTPP AAAPSEAPGA HILVAEDHPI NRELIAKQLR
LLGYRVTLAE DGVVALERLH EHRFDALLTD CHMPRMDGFD LARHIRHEEG DGPRLPIIAI
TATTLAEEHA RCRAVGMDAS LLKPTTLATL QEALSALCTG DVPAGAGGAA EEPPTLSLDD
LHAALGTDPA AIGLAQVFLS SLADDAQRLQ PLLDAMDRAA LRRWAHRTGG ALALLHNPGV
DAVAEAFRHA VHNGSANDIR AAGARTMRLL THINGLLSAF GSPAADVVHR TQVTDS
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