| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3340 |
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| Symbol | |
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| ID | 6289466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3497234 |
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| End bp | 3498418 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642626925 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001900894 |
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| Protein GI | 187930407 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.157564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.523018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGG GAAATCACAC GCGTAGCCGG GGGGCGCGCG GAGCGATGGG GTGCTTGCGG
CCGTGGGCCG CGCTTGCCGC GTGTGTGGCA TGCATGGCCG CGTTGACAGC GCCAGCGGCC
CACGCCGACA TCAGCATCAT CCAGTCTTTG CCGCTGTCCG GCACGCAAGC CGCGACGGGG
CGGGCGCTCA ATGCGGGCGC GCGGCTGTAT TTCGACTGGC TCAACCTGGA CGGCGGTATC
AACGGCGAGA CCATTCGCCT GGTCGCCCGT GACGACGAGC AGAAGGTCGA ACAGACCGTC
CGCAACGTGC GCGACATGGC CAAGATCGAC AACCCGGTGG CGGCGCTTAC CGTGGTCGGC
ACCGCCAATG TGGAAGCGCT CATGCGCAGC GGCGTGCTGA CCGAAGCCAA CCTGCCGCTG
GTTGGGCCGG CCACCGGGGC GTCCAGCATG ACCGGCGATC CGCTGGTGTT TCCCATCAAG
GCCAGCTACC GGCAAGAGAT CGACAAGATG GTGAGCGCGC TCGTTACCAT TGGCGTCACG
CGCATCGGCG TGCTGTATCA GGACGATGCG CTCGGCAAGG AGGTGCTGGC AGGCGTGGAG
CGCGCGCTCA AGCCGTACAA ACTCACGATG GGCGGCACGG CTTCGTACCC ACGCAATACG
GCTTCGGTGA GCGCCGCCGT CGACAAGCTG CTCGGCGCCG ATGTGCAGGC CATCTTCCTG
GGCGCCACGG CCGAACCCGC CGCGCAGTTC ATCAAGCAAT ACCGCGCGCG CGGTGGCGGC
GCGCAACTGC TGGGCCTGTC GTCGATTGAT CCGGGCATCC TGCTCCGGGT GGCCGGCATC
GACGCGGTGC GCGGCTATTC GCTGGCGCTC GTGATGCCGA ACCCCGGCAA GGGCGTGAAC
CCCGTCATCC GCGAATTCAA CCGCGCACGC GCGGCCGTGG GCGCCAAGGA TGTCGAACTT
TCATTCCGGG CGGTGGAAGG CTTTGTGGCC GCGAAGGTGC TGGCCGAAGC CGTGCGCCGC
GCCGGCCCCA AGCCCACGCG CGACCAGGTG CGCCGCGAGC TGGCCCACCT GCGCAACTTC
GATGTTGGCG GCGGGTTTAT GGTGGACTTT TCCGACCGCA CGCGTCCGGG CTCGCACTAT
GTGGAGTTGG GCGTGGTGGG GCCGAATGGG ATGGTGATTC AGTAA
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| Protein sequence | MQTGNHTRSR GARGAMGCLR PWAALAACVA CMAALTAPAA HADISIIQSL PLSGTQAATG
RALNAGARLY FDWLNLDGGI NGETIRLVAR DDEQKVEQTV RNVRDMAKID NPVAALTVVG
TANVEALMRS GVLTEANLPL VGPATGASSM TGDPLVFPIK ASYRQEIDKM VSALVTIGVT
RIGVLYQDDA LGKEVLAGVE RALKPYKLTM GGTASYPRNT ASVSAAVDKL LGADVQAIFL
GATAEPAAQF IKQYRARGGG AQLLGLSSID PGILLRVAGI DAVRGYSLAL VMPNPGKGVN
PVIREFNRAR AAVGAKDVEL SFRAVEGFVA AKVLAEAVRR AGPKPTRDQV RRELAHLRNF
DVGGGFMVDF SDRTRPGSHY VELGVVGPNG MVIQ
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