Gene Rpic_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3334 
Symbol 
ID6286282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3489086 
End bp3490582 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content67% 
IMG OID642626919 
Productglycerol kinase 
Protein accessionYP_001900888 
Protein GI187930401 
COG category[C] Energy production and conversion 
COG ID[COG0554] Glycerol kinase 
TIGRFAM ID[TIGR01311] glycerol kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.921166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.722803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACC TCCTCGCGCT CGACCAGGGC ACATCCAGCT CACGCGCCAT CGTCTTCAAC 
CGCGCCGGCC AGATCGTCGC CAGTGCCCAG CAGGAGTTTC CGCAGCATTT CCCGCAGCCC
GGCTGGGTCG AGCATGACCC GTTCGACATC TGGAACAGCC AGCTCGCCAC CTGCCGCGCC
GCACTCGAAC AAGCCAAGCT CTCCGCTGCC GACATGGCGG CGCTTGGCAT CACCAACCAG
CGCGAAACCA CCATGGTGTG GGAGCGCGCC ACGGGCAAAC CGATCTTCAA CGCCATCGTC
TGGCAGGACC GCCGCACCGA AGCCATCTGC GAAAGCCTGC GCGCCGAGGG CCTGGAAGAC
GAGGTGCGCA AGCGCACCGG CCTGATCATC GATCCGTATT TTTCGGCCAC CAAGCTGCGC
TGGATTCTCG ACCACGTGGA CGGCGGCCGC GAGCGCGCGG CACGTGGCGA ACTTGCCTTC
GGCACCATCG ACAGCTGGCT CGTCTGGCAA CTCACACGCG GCCGCCTGCA TGTGACCGAC
GTATCGAACG CTTCCCGCAC GATGCTGTGG AACATCCACA CCGGCGAATG GGATGCGGAC
CTGATGCGCG CGCTCGACAT TCACCCGAGC CTGTTGCCCG AGGTGCATCC GTCTGCGCAT
CAGTTCGGGC AGACCGATGC CGACTGGCTC GGCGCCTCGC TCACCATCGG CGGCATTGCC
GGCGACCAGC AATCGGCGCT CTTCGGCCAG GCCTGCTTCA AGCCGGGCAT GGCCAAGAAC
ACCTACGGCA CCGGCTGTTT CATGTTGCTC AACACGGGCG ACAAAGCGGT CCAGTCGCAC
AACGGCCTCA TCAGCACGGC GGCATGCCAG AGCGGCACGA AGCGCAGCTA TGCGCTCGAA
GGCAGCGTAT TCGTCGGTGG CGCGGTGGTG CAGTGGCTGC GCGACGGCCT GCGCGCCATC
CAGCGCTCCG CCGACGTCGA AGGCCTGGCC GCCTCGGTGC CCGATTCCGG CGGCGTGGTG
TTCGTGCCGT CGTTCACGGG CCTGGGGGCA CCGTACTGGG ACCCCACCGC GCAGGGCGCC
ATCGTCGGCC TCTCGCGCGG CACAACCATC GGCCACATCG CACGTGCGGC GCTCGAATCC
ATCGCCTTCC AGAGCACCGC ATTGCTGCAG GCTATGACGC GCGATGCCGT TTCCACCATC
TCGGAACTGC GCGTCGATGG CGGCGCCTCG GCCAACAACC TGCTCCTGCA GTTCCAGGCT
GACCTGCTCG GCATTCCGGT CGTGCGTCCG GAGATCATCG AGACCACGGC GCTGGGGGCG
GCTTACCTGG CGGGCATCGC CACCGGCTTC TATCGTGATG AAGCCGAGGT CGCCCAGCAA
TGGCGTGCCT CGCGCACGTT CCACCCCGTC ATCAGCCGCG ACGAGGCCGC ACACCGCATC
GCCCAATGGG AAATGGCCGT TGCGCAGGTC CGCCTGCCGA CAACGCGCGG CCACTGA
 
Protein sequence
MEYLLALDQG TSSSRAIVFN RAGQIVASAQ QEFPQHFPQP GWVEHDPFDI WNSQLATCRA 
ALEQAKLSAA DMAALGITNQ RETTMVWERA TGKPIFNAIV WQDRRTEAIC ESLRAEGLED
EVRKRTGLII DPYFSATKLR WILDHVDGGR ERAARGELAF GTIDSWLVWQ LTRGRLHVTD
VSNASRTMLW NIHTGEWDAD LMRALDIHPS LLPEVHPSAH QFGQTDADWL GASLTIGGIA
GDQQSALFGQ ACFKPGMAKN TYGTGCFMLL NTGDKAVQSH NGLISTAACQ SGTKRSYALE
GSVFVGGAVV QWLRDGLRAI QRSADVEGLA ASVPDSGGVV FVPSFTGLGA PYWDPTAQGA
IVGLSRGTTI GHIARAALES IAFQSTALLQ AMTRDAVSTI SELRVDGGAS ANNLLLQFQA
DLLGIPVVRP EIIETTALGA AYLAGIATGF YRDEAEVAQQ WRASRTFHPV ISRDEAAHRI
AQWEMAVAQV RLPTTRGH