Gene Rpic_3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3321 
Symbol 
ID6289272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3469162 
End bp3470352 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content62% 
IMG OID642626898 
Productelongation factor Tu 
Protein accessionYP_001900875 
Protein GI187930388 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG AAAAGTTCGA GCGGACTAAG CCGCACGTGA ACGTTGGTAC GATTGGTCAC 
GTTGACCACG GCAAGACGAC GCTGACGGCA GCGATCACGA CCGTGCTGGC GACCAAGTTT
GGTGGTGCCG CCAAGGCATA CGACCAGATT GATGCGGCGC CGGAAGAAAA GGCACGCGGC
ATCACGATCA ACACCGCACA CGTTGAGTAC GAAACGGCTA ACCGTCACTA CGCGCACGTT
GACTGCCCGG GCCACGCCGA CTACGTCAAG AACATGATTA CCGGTGCCGC CCAGATGGAC
GGCGCAATCC TGGTGTGCTC GGCCGCTGAC GGCCCGATGC CGCAAACGCG TGAGCACATC
CTGCTGGCCC GCCAGGTTGG TGTGCCGTAC ATCGTCGTGT TCCTGAACAA GTGCGACATG
GTGGACGACG CTGAGCTGCT GGAGCTGGTC GAGATGGAGG TGCGCGAACT TCTGTCGAAG
TACGACTTCC CGGGCGACGA CACCCCGATC ATCAAGGGTT CGGCCAAGCT GGCGCTGGAA
GGCGACAAGG GCGAGCTGGG CGAAGTGGCC ATCATGAACC TGGCCGACGC ACTGGACACC
TACATCCCGA CGCCGGAGCG CGCTGTTGAC GGCACGTTCC TGATGCCGGT GGAAGACGTG
TTCTCGATCT CGGGTCGCGG CACCGTGGTG ACCGGCCGTA TCGAGCGCGG CGTAGTCAAG
GTCGGCGAAG AGCTGGAAAT CGTCGGTATC AAGGCCACGC AGAAGACCAC CTGCACGGGC
GTGGAAATGT TCCGCAAGCT GCTGGACCAA GGTCAGGCAG GCGACAACGT CGGTATCCTG
CTGCGCGGCA CGAAGCGCGA AGACGTCGAG CGCGGCCAAG TGCTATGCAA GCCGGGTTCG
ATCAAGCCGC ACACGCACTT CACGGGCGAG GTCTACATCC TGTCGAAGGA CGAAGGCGGC
CGTCACACGC CGTTCTTCAA CAACTACCGT CCGCAGTTCT ATTTCCGTAC GACGGACGTG
ACCGGCTCGA TCGAGCTGCC GGCCGACAAG GAAATGGTCA TGCCGGGCGA CAACGTGTCG
ATCACCGTCA AGCTGATCGC CCCGATCGCC ATGGAAGAAG GTCTGCGCTT CGCTATCCGT
GAAGGCGGTC GTACCGTCGG CGCCGGCGTC GTCGCTAAGA TCATCGAGTA A
 
Protein sequence
MAKEKFERTK PHVNVGTIGH VDHGKTTLTA AITTVLATKF GGAAKAYDQI DAAPEEKARG 
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IVVFLNKCDM VDDAELLELV EMEVRELLSK YDFPGDDTPI IKGSAKLALE
GDKGELGEVA IMNLADALDT YIPTPERAVD GTFLMPVEDV FSISGRGTVV TGRIERGVVK
VGEELEIVGI KATQKTTCTG VEMFRKLLDQ GQAGDNVGIL LRGTKREDVE RGQVLCKPGS
IKPHTHFTGE VYILSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPADK EMVMPGDNVS
ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIE