Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3299 |
Symbol | |
ID | 6289659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3435626 |
End bp | 3436834 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642626875 |
Product | elongation factor Tu |
Protein accession | YP_001900853 |
Protein GI | 187930366 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00521718 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000291329 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAAGG AAAAGTTTGT ACGGACCAAA CCGCACGTGA ACGTTGGTAC GATCGGTCAC GTTGACCACG GTAAGACCAC GCTGACCGCA GCGATCGCAA CCGTGCTGTC CGCCAAGTTT GGTGGCGAAG CGAAGAAGTA CGACGAAATC GACGCAGCGC CGGAAGAAAA GGCACGCGGC ATCACGATCA ACACCGCGCA CGTCGAGTAC GAGACGGCCA ACCGTCACTA TGCGCACGTT GACTGCCCGG GCCACGCCGA CTACGTCAAG AACATGATCA CCGGTGCCGC CCAGATGGAC GGTGCCATCC TGGTGTGCTC GGCCGCTGAC GGCCCGATGC CGCAAACGCG TGAGCACATC CTGCTGGCCC GTCAGGTCGG CGTGCCGTAC ATCATCGTCT TCCTGAACAA GTGCGACATG GTGGACGACG CTGAATTGCT GGAACTGGTC GAGATGGAAG TGCGTGAACT TCTGTCGAAG TATGAGTTCC CGGGCGACGA CACCCCGATC ATCAAGGGTT CGGCCAAGCT GGCGCTGGAA GGCGACAAGG GCGAACTGGG CGAAGTGGCC ATCATGAACC TGGCCGACGC ACTGGACACC TACATCCCGA CGCCGGAACG CGCAGTTGAT GGTGCATTCC TGATGCCGGT GGAAGACGTG TTCTCGATCT CGGGTCGCGG CACCGTGGTG ACCGGCCGTA TCGAGCGCGG CATCATCAAG GTCGGCGAAG AAATCGAAAT CGTCGGTATC GCCGTGGACG GCGACAAGCC GAAGATCGAC AAGACCACCT GCACGGGCGT GGAAATGTTC CGCAAGCTGC TGGACCAAGG TCAGGCAGGC GACAACGTCG GCATTCTGCT GCGCGGCACG AAGCGCGAAG ATGTTCAGCG CGGTCAAGTG CTGGCCAAGC CGGGCTCGAT CAAGCCGCAC ACGGAATTCA CGGGCGAGGT CTACATCCTG TCGAAGGACG AAGGCGGCCG TCACACGCCG TTCTTCAACA ACTACCGTCC GCAGTTCTAC TTCCGTACGA CGGACGTGAC CGGCTCGATC GCCTTGCCGG AAGGCAAGGA AATGGTCATG CCGGGCGACA ACGTGTCGAT CACCGTCAAG CTGATCGCCC CGATCGCCAT GGAAGAAGGT CTGCGCTTCG CCATCCGTGA AGGCGGCCGT ACCGTGGGCG CTGGCGTCGT TGCCAAGATC CTGAAGTAA
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Protein sequence | MAKEKFVRTK PHVNVGTIGH VDHGKTTLTA AIATVLSAKF GGEAKKYDEI DAAPEEKARG ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLSK YEFPGDDTPI IKGSAKLALE GDKGELGEVA IMNLADALDT YIPTPERAVD GAFLMPVEDV FSISGRGTVV TGRIERGIIK VGEEIEIVGI AVDGDKPKID KTTCTGVEMF RKLLDQGQAG DNVGILLRGT KREDVQRGQV LAKPGSIKPH TEFTGEVYIL SKDEGGRHTP FFNNYRPQFY FRTTDVTGSI ALPEGKEMVM PGDNVSITVK LIAPIAMEEG LRFAIREGGR TVGAGVVAKI LK
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