Gene Rpic_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3297 
SymbolrplC 
ID6289657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3434268 
End bp3434921 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content62% 
IMG OID642626873 
Product50S ribosomal protein L3 
Protein accessionYP_001900851 
Protein GI187930364 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.38385e-07 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value8.07722e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCTTG GCCTTGTAGG TCGCAAGGTT GGCATGACCC GTATTTTCAC GGACGACGGC 
GATTCGATTC CCGTCACCGT GCTCGAGGTC GGCGACAACC GCGTGACGCA AATCAAGACG
GACGAGACCG ACGGTTATAC CGCGGTTCAA GTCACCTTCG GCACCCGACG CGCCAGCCGC
GTCACCAAGC CGCTGGCGGG TCATCTCGCC AAAGCCGGCG TGGAAGCGGG CGAAGTCATC
AAAGAATTCC GAGTGGATGC CGCTCGTGCC GCTGAATTCC AGCCGGGCGC GAACATCAGC
GTCGACCTGT TCGAAGTCGG TCAGAAGATC GACGTCCAGG GTGTGACGAT TGGTAAGGGC
TACGCCGGTA CCATCAAGCG TTACAACTTC TCGTCGGGCC GCGCCTCGCA CGGTAACTCG
CGCTCGCACA ACGTGCCGGG CTCGATCGGT ATGGCGCAGG ATCCGGGGCG CGTGTTCCCG
GGTAAGCGCA TGACCGGTCA CATGGGTGAT GTCACCCGTA CCGTTCAGAA TCTGGAAATC
GCCAAGATCG ACGCAGAGCG CAAGCTGCTG CTGGTCAAGG GTGCGATTCC GGGCGCCAAG
GGCGGTCAAG TCATCGTCAC GCCGGCCGTG AAGGCCCGCG CCAAGAAGGC ATAA
 
Protein sequence
MSLGLVGRKV GMTRIFTDDG DSIPVTVLEV GDNRVTQIKT DETDGYTAVQ VTFGTRRASR 
VTKPLAGHLA KAGVEAGEVI KEFRVDAARA AEFQPGANIS VDLFEVGQKI DVQGVTIGKG
YAGTIKRYNF SSGRASHGNS RSHNVPGSIG MAQDPGRVFP GKRMTGHMGD VTRTVQNLEI
AKIDAERKLL LVKGAIPGAK GGQVIVTPAV KARAKKA