Gene Rpic_3282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3282 
SymbolrplF 
ID6288297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3427356 
End bp3427889 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content61% 
IMG OID642626858 
Product50S ribosomal protein L6 
Protein accessionYP_001900836 
Protein GI187930349 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000490691 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00000852439 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTCGCG TAGGTAAGGC CCCCATCGCG CTGCCCAAGG GCGCAGAAGT CAATTTCGCT 
GGTGGTCTGC TGACCGTCAA GGGCCCGTTG GGCACGCTGA CGCAGCCGAT CCACTCGCTG
GTCAAGGTCA ACACCGACAA CGGCACGATC ACGTTCGCGC CGGCAGATGA GTCGCGTGAA
GCCAATGCGT TGCAAGGCAC GATGCGCGCC CTGACCGCCA ACATGGTCAA GGGTGTGACG
ACGGGCTTCG AGCGCAAGCT GAACCTGGTC GGCGTGGGTT ATCGTGCATC GGTTCAGGGC
ACCGCCCTGA AGCTGCAGCT CGGTTTCTCG CACGACGTGA TCCATGAGAT GCCGGAAGGC
GTGAAGGCGG AAACGCCGAC GCAGACCGAG ATCATCATCA AGGGTTCGGA CAAGCAAAAA
GTTGGTCAGG TCGCCGCTGA AGTGCGTGGT TATCGTCCGC CTGAGCCCTA CAAGGGCAAG
GGTGTGCGCT ACGCCGACGA GCGTGTGATC CTGAAGGAAA CCAAGAAGAA GTAA
 
Protein sequence
MSRVGKAPIA LPKGAEVNFA GGLLTVKGPL GTLTQPIHSL VKVNTDNGTI TFAPADESRE 
ANALQGTMRA LTANMVKGVT TGFERKLNLV GVGYRASVQG TALKLQLGFS HDVIHEMPEG
VKAETPTQTE IIIKGSDKQK VGQVAAEVRG YRPPEPYKGK GVRYADERVI LKETKKK