Gene Rpic_3281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3281 
SymbolrplR 
ID6288296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3426988 
End bp3427344 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content61% 
IMG OID642626857 
Product50S ribosomal protein L18 
Protein accessionYP_001900835 
Protein GI187930348 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000101647 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000625516 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAAA ATGACTCGCG TCTGCGCCGT GCACGTCAGA CCCGCCTGAA AATTGCGGAA 
CTGAGCGTCG CCCGTCTGGC TGTGCACCGT ACGAACCTGC ACATTTATGC GCAGGTCTTC
TCGGAAGACG GCACCAAGGT CCTGGCTTCG GCCTCGACGG CGGAAGCCGA AGTCCGCAAG
GAACTGAACG GCAACGGTGG CAACACCGCT GCTGCCACCC TGGTGGGTAA GCGTATCGCT
GAGAAGGCGA AGGCTGCCGG CATCGAAGCC GTGGCGTTCG ATCGCTCGGG TTTCCGTTAT
CACGGTCGCG TAAAGGCTCT GGCTGACGCG GCACGCGAAG CTGGCCTGAA GTTCTAA
 
Protein sequence
MNKNDSRLRR ARQTRLKIAE LSVARLAVHR TNLHIYAQVF SEDGTKVLAS ASTAEAEVRK 
ELNGNGGNTA AATLVGKRIA EKAKAAGIEA VAFDRSGFRY HGRVKALADA AREAGLKF