Gene Rpic_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3246 
Symbol 
ID6288293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3395126 
End bp3396292 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content62% 
IMG OID642626822 
Productdeoxyguanosinetriphosphate triphosphohydrolase-like protein 
Protein accessionYP_001900800 
Protein GI187930313 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0232] dGTP triphosphohydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC GATTTGATTT GCCGTCCGCG CCGTTCGATC TCGAAGGCCC TCTCGCTCCC 
TACGCCGCGC ATTCGGCGCA GACGCGCGGC CGCGTACACG CCGAGCCGCC ATCCACATCG
CGCACCGAGT TCCAGCGTGA CCGTGATCGC ATCATCCACA GCACCGCTTT CCGTCGGCTC
GAATACAAGA CGCAGGTCTT TGTGAACCAC GAGGGCGACC TGTTCCGGAC CCGGCTCACG
CACAGCCTCG AGGTCGCGCA GATTGCCCGT TCGATTGCGC GCAGCCTGCG CCTGAACGAA
GACTTGGTCG AAGCGGTTTC GCTGGCGCAC GATCTGGGCC ACACGCCGTT CGGTCATGCG
GGGCAGGACG CACTCAACGA TTGCATGAAG CCATACGGAG GCTTCGAACA CAATCTCCAG
AGCCTGCTGG TGGTCGATCG GCTGGAAGAG CGCTACGGCG GTTTCGATGG ACTGAACCTG
ACGTTCGAAA CGCGCGAGGG TATTCTCAAA CATTGCTCGC GCAACAACGC GGCCACGCTC
GGTGACTTGG GCCGCCGTTT TCTCGAAGGG CAACAGCCGT CGCTGGAAGC GCAGCTTGCC
AATCTCGCCG ATGAGGTCGC GTACAACAAC CACGATATCG ACGATGGCCT GCGTTCCGGC
CTGATCACGT TGGAGCAACT CGAAGACGTG CCGCTGTGGG CCATCCATCG GCGCGAAGCC
GAGGCGGCGT TCCCGGCCGT CAGTGGCCGG CGGCTCATCA ACGAAACCAT TCGTCGCATC
ATCAACGCGC TGATCGTCGA TCTGATCGGC ACCACGCGTG CCGGCATTGC TGAATTTGCG
CCGCAATGTA TCGACGATGT GCGTGCCGCG CCAGCGCTCG TCGCGTTCTC TGAGCCGATG
CATGAAGAGG CGCGCGTGCT CAAGCGCTTC CTGTTCGATA ACCTGTATCG GCACTATCTT
GTGATGCGCA TGTCCGCCAA AGCGCGCCGC ATCATCGACG ATCTGTTCCG CGTGTTCATG
GACGACCCGC GCTTGCTGCC ACCGCAGTAC CAGGCGAAAT CCAACCCCGA CGAGCAGCCG
CGCTGGATTG CGCATTACAT CGCCGGCATG ACGGATCGTT ACGCCATCAA GGAGCATCGC
CGCATCTTTG CGGTGGATGC GGTTTGA
 
Protein sequence
MNDRFDLPSA PFDLEGPLAP YAAHSAQTRG RVHAEPPSTS RTEFQRDRDR IIHSTAFRRL 
EYKTQVFVNH EGDLFRTRLT HSLEVAQIAR SIARSLRLNE DLVEAVSLAH DLGHTPFGHA
GQDALNDCMK PYGGFEHNLQ SLLVVDRLEE RYGGFDGLNL TFETREGILK HCSRNNAATL
GDLGRRFLEG QQPSLEAQLA NLADEVAYNN HDIDDGLRSG LITLEQLEDV PLWAIHRREA
EAAFPAVSGR RLINETIRRI INALIVDLIG TTRAGIAEFA PQCIDDVRAA PALVAFSEPM
HEEARVLKRF LFDNLYRHYL VMRMSAKARR IIDDLFRVFM DDPRLLPPQY QAKSNPDEQP
RWIAHYIAGM TDRYAIKEHR RIFAVDAV