| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3243 |
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| Symbol | |
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| ID | 6289020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3388275 |
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| End bp | 3393074 |
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| Gene Length | 4800 bp |
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| Protein Length | 1599 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642626819 |
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| Product | Glutamate synthase (ferredoxin) |
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| Protein accession | YP_001900797 |
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| Protein GI | 187930310 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTGTCT GCCACCGCAT CCGCACCATC GCGAGGGCCT TCTACGGCGC GCTGTACCCA
CAACATCGGA AGATCGCCGT GGAACAACAT TCCTTCCCCA TCACGCCGTC GGCGCCGTCG
GCCCAGGGTC TGTACGACCC GACCAATGAA CACGACGCTT GCGGCGTCGG CTTCGTCGCC
CATATCAAGG GCAAGAAGAG CCACGAGATC GTCCAGCAAG GCTTGCGCAT CCTGCACAAC
CTCGACCATC GCGGCGCCGT CGGCGCTGAC CCGCTGATGG GTGATGGCGC GGGCATCCTG
CTGCAGATTC CCGACCAGTT CTTCCGCGAA GAAATGGCCA AGCAGGGCAT CAACCTGCCG
CCGGCGGGCG AATACGGCGT CGGCATGATC TTCCTGCCGA AAGAACACGC GTCGCGCCTG
GCCTGCGAAC AGGAGTTGGA ACGCACCGTG CGCCTGGAAG GCCAGGTCGT GCTGGGCTGG
CGCGATGTGT CGGTCGACAA GACCATGCCG ATGTCGCCCA CGGTGCAGAA GACTGAGCCG
GTGATCCGCC AGATCTTCAT CGGGCGCGGT CGCGACATCA TGACCACCGA TGCGCTGGAG
CGGAAGCTGT ATGTGATTCG CAAGACCGCA AGCCACGCCA TCCAGGCGCT CAAGCTCAAG
CATGGCAAGG AATACTTCGT GCCGTCGATG TCGGCGCGCA CGATCGTCTA CAAGGGCCTG
CTGCTGTGCG AACAGGTCGG CCGCTACTAC CAGGATTTGG CAGACCCGCG TACGGTGTCG
GCGCTGGCGC TGGTGCACCA GCGTTTCTCG ACCAACACGT TCCCCGCATG GGAGCTGGCG
CACCCGTACC GCATGGTTGC GCACAACGGC GAAATCAACA CCGTCAAGGG CAACGTCAAC
TGGATCAACG CGCGTACGGG CGGCATCTCG TCGCCGGTGC TGGGCGATGA CCTGCCCAAG
CTGTGGCCGC TGATCTATCC GGGTCAATCG GATACCGCAT CGTTCGACAA CTGCCTCGAA
CTGCTGACGA TGGCCGGCTA CCCGCTGGCC CAGGCAATGA TGATGATGAT TCCGGAAGCG
TGGGAACAGC ACACGCTGAT GGACGACAAC CGCCGCGCGT TCTACGAATA CCACGCCGCA
ATGATGGAGC CGTGGGACGG CCCCGCAGCC ATCTGCTTTA CCGATGGTCG CCAGATCGGC
GCGACGCTCG ACCGTAACGG CCTGCGCCCG GCGCGTTATT ACGTCACCGA CGACGACATG
GTCGTGATGG CATCCGAGGC CGGCGTGCTG CCGATCCCCG AGTCGCGCAT CGTCAAGAAG
TGGCGTCTGC AGCCGGGCAA GATGTTCCTG ATCGACATGG AGCAGGGCCG CATCATCGAC
GACAAGGAAC TCAAGGACAA CCTGGCCAAC GCCAAGCCGT ACAAGAGCTG GATCGATGCC
GTGCGCATCA AGCTCGACGA GCTGGACGCG AAGCCCGAAG ACGTGGCCGC CGAAACCAAG
CCGGCCGCCA AGCTGCTGGA TCGCCAGCAG GCCTTCGCCT ACACGCAGGA AGACGTCAAG
TTCCTGATGG CGCCGATGGC CGCCAACGGC GAAGAAGCCG CCGGATCTAT GGGCAACGAC
AGCCCGCTGG CCGTGCTGTC CTCGAAGAAC AAGACGCTCT ACAACTACTT CAAGCAACTG
TTCGCGCAGG TCACGAACCC GCCGATCGAC CCGATCCGCG AAAACGTGGT GATGTCGCTC
GTCTCGTTCA TCGGGCCGAA GCCGAACCTG CTTGAGCTGA ACAACATCAA CCCGCCGATG
CGCCTTGAAG TGAGCCAGCC CGTGCTGGAC TTCAAGGACA TGGCGAAGAT CCGCAACATC
GAGCACTACA CCGGCGGCAA GTTCATGGCT TACGAGCTGG ACATCTGCTA TCCGGTGGCG
TGGGGCAAGG AAGGCATCGA AGCGCGCCTG GCTTCGCTGT GCGCCGAGGC TGTCGATGCG
GTCAAGTCGG GCTACAACAT CCTGATCGTT TCGGACCGCG CGGTCGACGA GAAGCAGGCC
GCGATTCCGG CGCTGCTGGC CACGTCCGCC ATCCACCATC ACCTAGTGGA CAAGGGCTTG
CGCACGAGCA CGGGTCTGGT CGTCGAAACG GGCTCGGCCC GCGAAGTGCA CCACTTCGCG
CTGCTGGCCG GCTATGGCGC AGAAGCCGTG CACCCGTATC TGGCGATGGA GACGCTGGCC
GAATTGGCGC CGGGCCTGGG CCTGACCGCC GAGAAGGCCA TCTACAACTT CACCAAGGCG
ATCGGCAAGG GCCTGCACAA GGTGATGTCC AAGATGGGCA TCTCGACGTA CATGTCGTAC
ACCGGCGCGC AGATCTTCGA AGCGATCGGC CTGTCGCGCG AACTGGTCGA CAAGTACTTC
CAGGGCACCG CATCCAACGT GGGCGGCATC GGCATCTTCG AGGTGGCTGA AGAGGCGCTG
CGCCTGCACC GCGATGCCTT TGGCGATGCA CCGGTGCTGG CGAACATGCT CGACGCGGGC
GGCGAATACG CCTACCGCGT CCGCGGCGAA GAGCACATGT GGACGCCGGA TTCGATCGCC
AAGCTGCAGC ACGCGACGCG CGCGAATTCG TACCAGACGT ACAAGGAATA CGCGAACCTG
ATCAACGACC AGAGCAAGCG CCACATGACG CTGCGCGGCC TGTTCGAGTT CAAGGTGGAT
CCGGCACGCG CGATTCCGCT GGAGGAAGTC GAACCGGCCA AGGAGATCGT CAAGCGCTTT
GCTACCGGCG CCATGTCGCT GGGTTCGATC AGCACGGAAG CGCACACCAC GCTGGCCGTG
GCGATGAACC GCATCGGCGG CAAGTCGAAC ACGGGCGAAG GCGGTGAAGA CGAGCGCCGT
TACCGCAACG AACTGCGCGG CATTCCCATC AAGCAGGGCA CCAAGCTGTC GGATGTGATC
GGCCGCGAAG TGGTCGAGCG CGATCTGGAA CTGCAAGAGG GCGATTCCCT GCGCTCGAAA
ATCAAGCAGG TAGCCTCGGG CCGCTTTGGC GTGACGGCCG AGTACCTGGC TTCAGCTGAT
CAGATCCAGA TCAAGATGGC GCAGGGCGCC AAGCCCGGCG AGGGCGGTCA ACTGCCCGGC
CACAAGGTGA CGGATTACAT CGGCAAGCTG CGTTATGCAG TGCCGGGCGT GGGCCTGATC
TCGCCGCCGC CGCACCACGA CATCTATTCG ATTGAAGATC TGGCACAGCT CATCCATGAC
CTGAAGAATG TGAACCCGCG TTCGGACGTG TCGGTCAAGC TGGTGTCGGA AGTGGGCGTC
GGCACGGTGG CGGCCGGTGT CGCCAAGGCC AAGGCAGACC ACGTGGTGAT CGCAGGCCAT
GACGGCGGTA CGGGCGCTTC GCCATGGTCG TCGATCAAGC ATGCCGGCAC GCCGTGGGAG
CTGGGCCTGG CCGAGACGCA GCAGACGCTG ATGCTCAACG GCCTGCGCAA CCGTATCCGC
GTGCAGGCTG ACGGCCAGAT GAAGACCGGC CGTGACGTCG TGATCGGCGC GCTGCTGGGC
GCCGACGAAT TCGGCTTTGC GACCGCACCG CTGGTGGTCG AAGGCTGCAT CATGATGCGC
AAGTGCCATC TGAACACCTG CCCGGTGGGT GTGGCGACGC AGGATCCGGT GCTGCGCAAG
AAGTTCTCGG GCAAGCCCGA GCACGTGGTG AACTACTTCT TCTTCGTGGC CGAGGAAGTG
CGCGAAATCA TGGCGCAACT GGGCATCCGC ACGTTCAACG AACTGATCGG CCGCGCAGAT
CTGCTCGACA CGAAGTCCGG CATCGAACAC TGGAAGGCCC GCGGCCTGGA CTTCGCGCGC
ATCTTCTACC AGCCGGCCAA GAAGGAAGGC GAGCCGTGCT ACCAGGTCGA TGTGCAAGAC
CACGGTCTGG ATCGTGCACT GGATCACCAG CTCATCGAGA AGTCCAAGGC TGCGCTGGAG
AAAGGCGAGC GTGTTTCGTT CATCCAGCCG GTGCGCAACG TCAACCGCAC GGTCGGCGCG
ATGCTCTCGG GCGAAGTCGC CAAGCGTTAT GGCCACGAAG GTCTGCCTGA TGATTCGATC
CACGTGCAGA TGCAGGGCAC GGCCGGCCAG TCGTTCGGCG CGTTCCTGGC GCATGGCATC
ACGCTGGACC TGGTGGGTGA CGGCAACGAC TACGTGGGCA AGGGCCTGTC GGGCGGCCGC
GTGATCGTAC GCCCGCCGCA CGAATTCCGT GGCGAGCCGA CCAACAACAT CATCGTCGGC
AACACCGTGC TGTACGGCGC GCTGGCTGGT GAGGCGTTCT TCAACGGCGT GGCCGGCGAG
CGCTTCGCGG TGCGCAACTC CGGCGCCACC ACGGTGGTGG AAGGCACGGG CGACCACGGC
TGTGAATACA TGACCGGCGG CACGGTTGTC GTGCTCGGTG CCACCGGCCG CAACTTCGCG
GCAGGCATGT CGGGTGGCGT CGCCTACGTC TATGACGAAG ACGGCCTGTT CGACAAGCGC
TGCAACACGG CGCAGGTCGC CCTGGAATCC GTGCTGTCGG CGGCTGACCA GGAGAAGGCA
CATACCCCGT CGACCTGGCA CAAGGTGAAC GGCGAGCGCG TGCTCGACGA GCAACTGCTC
AAGGCGCTGG TGGAAAAGCA CTTCCGCTAC ACCGGCTCCG AGCGTGCCAA GGAACTGCTG
GCCGACTGGA ACAACGCCCG TCGCCGCTTC GTCAAGGTCT TCCCGACCGA GTACAAGCGG
GCGCTGGCCG AGATGTACGA ACGCGAACAG GAAGCCGGCC GCGAACAGAT CGCTGCCTGA
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| Protein sequence | MPVCHRIRTI ARAFYGALYP QHRKIAVEQH SFPITPSAPS AQGLYDPTNE HDACGVGFVA
HIKGKKSHEI VQQGLRILHN LDHRGAVGAD PLMGDGAGIL LQIPDQFFRE EMAKQGINLP
PAGEYGVGMI FLPKEHASRL ACEQELERTV RLEGQVVLGW RDVSVDKTMP MSPTVQKTEP
VIRQIFIGRG RDIMTTDALE RKLYVIRKTA SHAIQALKLK HGKEYFVPSM SARTIVYKGL
LLCEQVGRYY QDLADPRTVS ALALVHQRFS TNTFPAWELA HPYRMVAHNG EINTVKGNVN
WINARTGGIS SPVLGDDLPK LWPLIYPGQS DTASFDNCLE LLTMAGYPLA QAMMMMIPEA
WEQHTLMDDN RRAFYEYHAA MMEPWDGPAA ICFTDGRQIG ATLDRNGLRP ARYYVTDDDM
VVMASEAGVL PIPESRIVKK WRLQPGKMFL IDMEQGRIID DKELKDNLAN AKPYKSWIDA
VRIKLDELDA KPEDVAAETK PAAKLLDRQQ AFAYTQEDVK FLMAPMAANG EEAAGSMGND
SPLAVLSSKN KTLYNYFKQL FAQVTNPPID PIRENVVMSL VSFIGPKPNL LELNNINPPM
RLEVSQPVLD FKDMAKIRNI EHYTGGKFMA YELDICYPVA WGKEGIEARL ASLCAEAVDA
VKSGYNILIV SDRAVDEKQA AIPALLATSA IHHHLVDKGL RTSTGLVVET GSAREVHHFA
LLAGYGAEAV HPYLAMETLA ELAPGLGLTA EKAIYNFTKA IGKGLHKVMS KMGISTYMSY
TGAQIFEAIG LSRELVDKYF QGTASNVGGI GIFEVAEEAL RLHRDAFGDA PVLANMLDAG
GEYAYRVRGE EHMWTPDSIA KLQHATRANS YQTYKEYANL INDQSKRHMT LRGLFEFKVD
PARAIPLEEV EPAKEIVKRF ATGAMSLGSI STEAHTTLAV AMNRIGGKSN TGEGGEDERR
YRNELRGIPI KQGTKLSDVI GREVVERDLE LQEGDSLRSK IKQVASGRFG VTAEYLASAD
QIQIKMAQGA KPGEGGQLPG HKVTDYIGKL RYAVPGVGLI SPPPHHDIYS IEDLAQLIHD
LKNVNPRSDV SVKLVSEVGV GTVAAGVAKA KADHVVIAGH DGGTGASPWS SIKHAGTPWE
LGLAETQQTL MLNGLRNRIR VQADGQMKTG RDVVIGALLG ADEFGFATAP LVVEGCIMMR
KCHLNTCPVG VATQDPVLRK KFSGKPEHVV NYFFFVAEEV REIMAQLGIR TFNELIGRAD
LLDTKSGIEH WKARGLDFAR IFYQPAKKEG EPCYQVDVQD HGLDRALDHQ LIEKSKAALE
KGERVSFIQP VRNVNRTVGA MLSGEVAKRY GHEGLPDDSI HVQMQGTAGQ SFGAFLAHGI
TLDLVGDGND YVGKGLSGGR VIVRPPHEFR GEPTNNIIVG NTVLYGALAG EAFFNGVAGE
RFAVRNSGAT TVVEGTGDHG CEYMTGGTVV VLGATGRNFA AGMSGGVAYV YDEDGLFDKR
CNTAQVALES VLSAADQEKA HTPSTWHKVN GERVLDEQLL KALVEKHFRY TGSERAKELL
ADWNNARRRF VKVFPTEYKR ALAEMYEREQ EAGREQIAA
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