| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3242 |
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| Symbol | gltD |
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| ID | 6289019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3386671 |
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| End bp | 3388134 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642626818 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001900796 |
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| Protein GI | 187930309 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGG CGACCGGTTT TCTCGAATTT CCCCGCCAGA ACGAGGCATA CGAAGCGCCC
GAAGCGCGTG TGAAGCATTA CAAGGAATTC GTGTTCGCAC TGGCGGACAA CGAAGCCAAG
ATCCAGGGCG CACGCTGCAT GGACTGCGGC ATTCCGTTCT GCAACAACGG CTGCCCGGTC
AACAACATCA TCCCGGACTT CAACGACCTG GTGTATCGCC AGGACTGGAA GACCGCGATT
GAAGTGCTGC ACTCGACCAA CAACTTCCCC GAGTTCACGG GCCGCATCTG CCCGGCACCG
TGCGAGGCGG CTTGCACGCT GGGCATTAAT GAACTGCCGG TCGGTATCAA GTCGATCGAG
CACGCGATCA TCGACAAGGC CTGGAAAGAA GGCTGGGTCG CGCCGCAAGT GCCCAAGCAC
AAGACCGGCA AGACCGTGGC CGTGGTCGGT TCGGGCCCGG CTGGTATGGC CGCTGCGCAG
CAGCTGGCAC GCGCTGGCCA CGACGTGACG CTGTTCGAAA AGAACGACCG CATCGGCGGC
CTGCTGCGCT ACGGCATTCC CGACTTCAAG CTGGAAAAGG CGCAGATCGA CCGCCGCATG
CAGCAGATGG AAGCCGAGGG CGTGACGTTC CGCACCGGCG TGATGGTGGG CGACAAGACG
GTTCCGGCCG GCATCACCAA CGACGCACGC GAGACCATCG CCGCGGAAGA CATCCTCAAG
CAATTCGACG CCGTCGTGCT GACGGGCGGA TCGGAAGTGC CGCGCGATCT GCCAGTGCCG
GGCCGTGACC TGGACGGCGT GCATTACGCG CTCGAATTTC TGATCCCGCA GAACAAGGAA
GTGGCCGGCG ACGTGCCCAA CCCGATCCGC GCCGACGGCA AGCACGTCAT CGTGATCGGC
GGCGGCGACA CGGGTTCGGA CTGCGTGGGC ACGTCCAACC GCCATGGCGC CGCATCGGTC
ACGCAGTTCG AACTGCTGCC GCGTCCGCCC GAAGAAGAGA ACAAGCCGCT GGTGTGGCCG
TACTGGCCGA TCAAGTTGCG CACGTCGTCG TCGCATGATG AAGGCTGCGA GCGCGACTGG
TCGGTCGCAA CCAAGGCGCT CATCGGCGAG AACGGCCGCG TGACGGGCCT CACCGCCGTG
CGCCTTGAGT GGAAGGACGG CAAGATGGTC GAGGTCGCGG GCAGCGAATT CACCCTCAAG
GCCGATCTGG TTCTGTTGGC GATGGGCTTT ACCAACCCGG TCGGTGGTGT GCTGGATGCC
TTTGGCGTGA CAAAGGACGC GCGCAACAAC GCGCGTGCCG CCACCGAAGG CGACAACGCT
TACGCCACCA ACGTGCCGAA GGTGTTCGCT GCCGGCGATG TGCGCCGCGG CCAGTCGCTC
GTCGTGTGGG CGATCCGGGA AGGCCGCCAG GCTGCCCGCT CGGTTGATGC GTTTCTCATG
GGTCATTCGG AACTGCCGCG CTGA
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| Protein sequence | MGKATGFLEF PRQNEAYEAP EARVKHYKEF VFALADNEAK IQGARCMDCG IPFCNNGCPV
NNIIPDFNDL VYRQDWKTAI EVLHSTNNFP EFTGRICPAP CEAACTLGIN ELPVGIKSIE
HAIIDKAWKE GWVAPQVPKH KTGKTVAVVG SGPAGMAAAQ QLARAGHDVT LFEKNDRIGG
LLRYGIPDFK LEKAQIDRRM QQMEAEGVTF RTGVMVGDKT VPAGITNDAR ETIAAEDILK
QFDAVVLTGG SEVPRDLPVP GRDLDGVHYA LEFLIPQNKE VAGDVPNPIR ADGKHVIVIG
GGDTGSDCVG TSNRHGAASV TQFELLPRPP EEENKPLVWP YWPIKLRTSS SHDEGCERDW
SVATKALIGE NGRVTGLTAV RLEWKDGKMV EVAGSEFTLK ADLVLLAMGF TNPVGGVLDA
FGVTKDARNN ARAATEGDNA YATNVPKVFA AGDVRRGQSL VVWAIREGRQ AARSVDAFLM
GHSELPR
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