Gene Rpic_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3240 
Symbol 
ID6289017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3384337 
End bp3385170 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content65% 
IMG OID642626816 
ProductABC transporter related 
Protein accessionYP_001900794 
Protein GI187930307 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.738413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCACCC AGCCTTCCAA CGCCGTTGTC GAACTCGATC AGGTCGATTT CGCCTATCAG 
CCAGGCGCGC GGCGCATCCT GTCCGGCCTG TGCATGCGCG TGCCCAAGGG CAGCGTGGTG
GCCGTCATGG GCGGCTCGGG CTGCGGCAAG ACGACGATTC TCCGGTTGAT TGGCGGCCAA
GTGGCCGCTG CCGCCGGCAC TGTACGCGTG CACGGCCAGG ATATCGGCGC CATGGACAAG
CGCGCGCTGT ACGCTGCGCG CCGCCAGATG GGCATGCTGT TCCAGTTTGG GGCGCTGTTT
ACCGATCTGT CCGTGTTCGA CAATGTGGCA TTTCCACTGC GCGAACATAC CGAACTGCCC
GAACTGCTCA TCCGCGATCT GGTGCTGATG AAGCTGAACG CCGTCGGCCT GCGCGGTGCG
CGCGACCTGA TGCCTTCGGA AATTTCCGGC GGCATGGCCC GGCGCGTGGC GCTGGCGCGG
GCGATTGCGC TGGATCCGTC GCTCATCCTC TATGACGAGC CGTTCGCCGG GCTGGACCCG
ATCTCGTTGG GCCTGACCGC GTCGCTCATC CGCAAGCTGA ACGACGCGCT CGGCGCGACC
AGTATCATCG TCTCGCACGA CGTGCAGGAG ACGTTCCACA TTGCCGATTA CGTCTACTTC
ATTGCCAACG GTGGCATTGC TGCCGCAGGC ACGCCGGCAG AGCTGACCGC ATCGACCGAT
CCGTTCGTCC GTCAGTTCGT GCACGGAGAG GCGGACGGTC CCGTGCCGTT CCACTATCCC
GGGGCACCGC TGGCAGATGA CTTCGGTCTG GGCAAGAGCG GAGGCGCACG ATGA
 
Protein sequence
MSTQPSNAVV ELDQVDFAYQ PGARRILSGL CMRVPKGSVV AVMGGSGCGK TTILRLIGGQ 
VAAAAGTVRV HGQDIGAMDK RALYAARRQM GMLFQFGALF TDLSVFDNVA FPLREHTELP
ELLIRDLVLM KLNAVGLRGA RDLMPSEISG GMARRVALAR AIALDPSLIL YDEPFAGLDP
ISLGLTASLI RKLNDALGAT SIIVSHDVQE TFHIADYVYF IANGGIAAAG TPAELTASTD
PFVRQFVHGE ADGPVPFHYP GAPLADDFGL GKSGGAR