Gene Rpic_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3226 
Symbol 
ID6287349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3372934 
End bp3373557 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content62% 
IMG OID642626802 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_001900780 
Protein GI187930293 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGA CAAAAAGCTT CTTCTCGCTG CTCGCGCTGA TCAACCCGAT CGGGGCGATC 
CCGTTCTTCA TCAGCCTGAC CGAGAGCCAG ACGGATGAGG AGAAGCGCCG CACCATCAAG
GTTGCGTCGA TTTCGGTGGC AATTGTGATT GGCCTGTCGG CGTTGCTGGG CGAGCAGATC
ATCAGCTTTT TCGGGTTCTC AGTTGGCTCG TTGCAGGTCG GCGGCGGGAT CATCATGATC
ATGATCGCGC TGAACATGCT CAATGCGCAG ACCAGCCGCA CCAAGGCCAC GCCCGAGGAA
GAGGACGAGG CCGGCGCCAA GGCCAGCATT GCCGTCGTGC CGCTGGCGAT TCCGCTGCTC
ACGGGCCCCG GCTCGATCAG CACCGTGATC GTCTATGCGG GAAAGACCAA GCACTGGTGG
GAGCTGTTGC TTCTGGCCGG CGTGGGCGTG GCAATCGCGG GCGTGGTCTG GATTGTGTTG
CGCGCGGCGG AGCCCATCGC CCGTGTGATC GGCCGCACCG GCATCAACGT CGGTACGCGG
TTGATGGGCT TGATCCTGGC GGCGCTTGCC GTGGAATTCA TCGTTGACGG GCTGAAAACC
CTGTTGCCCG TACTTAGGGC CTAA
 
Protein sequence
MDLTKSFFSL LALINPIGAI PFFISLTESQ TDEEKRRTIK VASISVAIVI GLSALLGEQI 
ISFFGFSVGS LQVGGGIIMI MIALNMLNAQ TSRTKATPEE EDEAGAKASI AVVPLAIPLL
TGPGSISTVI VYAGKTKHWW ELLLLAGVGV AIAGVVWIVL RAAEPIARVI GRTGINVGTR
LMGLILAALA VEFIVDGLKT LLPVLRA