Gene Rpic_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3142 
Symbol 
ID6288600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3291303 
End bp3291797 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content64% 
IMG OID642626717 
Productresponse regulator receiver protein 
Protein accessionYP_001900696 
Protein GI187930209 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.460947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.158986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTTT CCACGCTCAT TGCCACCATG CTCAAACCCA TCCTGCTCGT TGAAGACAAT 
CCGAACGACC TCGAGCTGAC CCTGCTGGCG CTGGAGCGCA GCCAGCTTGC CAACGATGTG
GTCGTCACCC GCGACGGCGC TGAAGCGCTG GACTACCTGC ACGCGCGCAA CCTGTACGCG
CAACGCGTGC CGGGCAACCC TGCCGTGGTG CTGCTCGACT TGAAGCTGCC CAAGGTCGAC
GGGCTGGAAG TGCTGGCCGA GATCCGTGCC ACGCCCGCGC TCAAGAGCCT GCCCGTGGTC
ATGCTCACGT CGTCGCGCGA AGAAACCGAT CTGCTGCGCA GCTACGAACT GGGCGTCAAC
GCCTACGTGG TCAAACCGGT GGAGTTCCGG GCGTTTGTCG ATGCGATTGC CGACCTGGGC
GTATTCTGGG CGGTGCTCAA TGAACCGCCG CCCGGCTCCA CCCGGGCACG CCGCACGTTG
CTGCCGGTAA GCTAG
 
Protein sequence
MVLSTLIATM LKPILLVEDN PNDLELTLLA LERSQLANDV VVTRDGAEAL DYLHARNLYA 
QRVPGNPAVV LLDLKLPKVD GLEVLAEIRA TPALKSLPVV MLTSSREETD LLRSYELGVN
AYVVKPVEFR AFVDAIADLG VFWAVLNEPP PGSTRARRTL LPVS