Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3142 |
Symbol | |
ID | 6288600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3291303 |
End bp | 3291797 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642626717 |
Product | response regulator receiver protein |
Protein accession | YP_001900696 |
Protein GI | 187930209 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.460947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.158986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCTTT CCACGCTCAT TGCCACCATG CTCAAACCCA TCCTGCTCGT TGAAGACAAT CCGAACGACC TCGAGCTGAC CCTGCTGGCG CTGGAGCGCA GCCAGCTTGC CAACGATGTG GTCGTCACCC GCGACGGCGC TGAAGCGCTG GACTACCTGC ACGCGCGCAA CCTGTACGCG CAACGCGTGC CGGGCAACCC TGCCGTGGTG CTGCTCGACT TGAAGCTGCC CAAGGTCGAC GGGCTGGAAG TGCTGGCCGA GATCCGTGCC ACGCCCGCGC TCAAGAGCCT GCCCGTGGTC ATGCTCACGT CGTCGCGCGA AGAAACCGAT CTGCTGCGCA GCTACGAACT GGGCGTCAAC GCCTACGTGG TCAAACCGGT GGAGTTCCGG GCGTTTGTCG ATGCGATTGC CGACCTGGGC GTATTCTGGG CGGTGCTCAA TGAACCGCCG CCCGGCTCCA CCCGGGCACG CCGCACGTTG CTGCCGGTAA GCTAG
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Protein sequence | MVLSTLIATM LKPILLVEDN PNDLELTLLA LERSQLANDV VVTRDGAEAL DYLHARNLYA QRVPGNPAVV LLDLKLPKVD GLEVLAEIRA TPALKSLPVV MLTSSREETD LLRSYELGVN AYVVKPVEFR AFVDAIADLG VFWAVLNEPP PGSTRARRTL LPVS
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