| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3111 |
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| Symbol | |
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| ID | 6287873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3254300 |
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| End bp | 3255457 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642626682 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001900666 |
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| Protein GI | 187930179 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCTC GTAGAATCAC CGCGCTGCTG GCCATGTTCG CAGCGGGCAT CGTCGGCATC
GCTTCGGGCG GCGCGCATGC CGAGACGGGC GTGACCAACG ACGCGATCAT CGTCGGCCAA
TCGGCGCCAA TGAGCGGCCC GGCCGCAAAG CTTGGTCAGC AGATGAACCG CGGCGCCCAG
TTGTACTTCA ACGCCGTCAA CGCCGCAGGT GGCATCAACG GACGCAAGAT CGAATTGAAG
GTGCTCGACG ATTTCTACGA GCCCGATGCG ACTGCCCGCA ACACCAAGAC GCTCATCGAA
GACACCAAGG TCTTCGCCCT GTTTGGCTAT GTCGGTACGC CGACCAGCCT GGCGGCGCTG
AAGATCGCCA ACCCGGCGGG CGTGCCGTTC TTTGCGCCGT ACTCCGGCGC CTCGGCGCTG
CGCGAGCCCT TCGCGCGCAA TGTGTTCCAC GTGCGCGCCA GCTACAACGA TGAAACCGCC
GCCATCGTCC AGCAGATCCA CACCACGGGC CTCAAGCGCA TTGCCGTCAT CTATAACGAC
GACGCCTACG GCAAAGCGGG CCTTGACGGT GTACAGCGCG CGCTCAAGCT GCCGGCAAAC
AAGGGGGTGT CGCTCGTCGC GCAGGCCAGC GTCGTCCGCA ACACCACCGA CGTGAAGAGC
GCGATCACCA CAGTGCTCGA GCAGAAGCCG GATGTCGTCG TCGTCATCAG CGCATACCAG
ACCGTGGCAG CCCTCGTGAA GGGCGCACAA GAACAGGGGT ATGCGGGCCA GTTCTACAAC
GTGTCGTTTG TCGGCACCAA GGCGCTCGCC AACGCACTCG GCAAGGCCGG CGGCGGCGTG
ATCATCTCTC AGGTGATGCC GTATCCGTAT AGCGGCGCGT CACCCGTGGT TCGCGATTAC
CAGAAGCTGC TCAAATCGGA TGGCATTACC GATTTCGACT ACGGGAGCAT CGAAGGCTAC
GTCGCTGCGC GCGTCTTTGT TGAAGGCCTC AAGCGTGCGG GCCGCGACCT GACCCGCGAG
AAGTTCGTCG GGGCGCTGGA GACGATGGGC AACTACGACG TGGGTGGCTT CAACGTGAAC
TTCTCGCCCT CCAACCACGT CGGCTCCAAG TTCGTTGAGA TGACGATCAT CAACTCTAAC
GGGCAAGTGA TCCGCTGA
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| Protein sequence | MQSRRITALL AMFAAGIVGI ASGGAHAETG VTNDAIIVGQ SAPMSGPAAK LGQQMNRGAQ
LYFNAVNAAG GINGRKIELK VLDDFYEPDA TARNTKTLIE DTKVFALFGY VGTPTSLAAL
KIANPAGVPF FAPYSGASAL REPFARNVFH VRASYNDETA AIVQQIHTTG LKRIAVIYND
DAYGKAGLDG VQRALKLPAN KGVSLVAQAS VVRNTTDVKS AITTVLEQKP DVVVVISAYQ
TVAALVKGAQ EQGYAGQFYN VSFVGTKALA NALGKAGGGV IISQVMPYPY SGASPVVRDY
QKLLKSDGIT DFDYGSIEGY VAARVFVEGL KRAGRDLTRE KFVGALETMG NYDVGGFNVN
FSPSNHVGSK FVEMTIINSN GQVIR
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