| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3110 |
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| Symbol | |
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| ID | 6287872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3252437 |
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| End bp | 3254152 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642626681 |
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| Product | PTS system, fructose subfamily, IIC subunit |
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| Protein accession | YP_001900665 |
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| Protein GI | 187930178 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACC TGCTGGCAAT TCTCGGTGCA GACGGCCGCA CCACCCGCGC GATGCTCGCC
GGCGCAGCCC TGCGCCACGC GGCGCGCGAA TCCGGCTGCA AGCTCGACGT CGACGTGCGC
GGCCCCGACA CCGTCTCGGT CGTCGACACG GCAGCGCTGG CCACCGCCGA GGCCGTCGTC
TGGGCGGGCC TCGTGCCGGA CGCAGCGGCT CGCCACGCCA ATCCGCGCAC GCTTGAAGTC
ACGCTCGACG AAGTACTCGC GGACGCTCGT GCCGTACTGG CCCGCATGAT CGGCAACGCC
CCGCCCGTTC CCAAAGCCGG CGCGCAAGCT CAACGCATCG TCGCCATCAC TTCGTGCCCG
ACCGGCATTG CGCACACCTT CATGGCCGCC GAGGCGCTCA CGCAGGCCGC CGGCGCGCTC
GGTCACACGA TCCACGTGGA AACGCAGGGT TCGGTGGGCG CACAGAACAC GCTGTCGGCC
GATGCCATCG CAACCGCAGA CCTCGTGCTG ATCGCCGCCG ACACGCAAGT CGACCTGTCA
CGCTTTGCCG GCAAGCGCGT CTTCCGCGCC GGCACCAAGG TGGCCATCCA CGATGGGCAG
GCATTGATCC GCCGGGCCTT CGACGAAGCC TCGCTAGAAG GCGCGGGGAC GGCGCAATTG
GCGGGCACCG CGGCCGCCGC GGCTGAACAG CAGCGCACCG GCCCGTACAA GCACCTGATG
ACCGGCGTGT CGTTCATGCT GCCCTTCGTG GTGGCTGGGG GCATCCTGAT TGCACTGGCG
TTCGCCCTGG GCGGCATCTA CGTGACGGAC GCCTCGGCCA GCCACACGCT GGGCGGCGTG
CTGTTCCAGA TCGGAGCCAA GTCGGCGTTT GCCTTGATGG TGCCCGTGCT CGCCGGATAC
ATCGCGTACT CGATCGCCAG CCGGCCCGGT ATTGCCCCCG GGATGGTCGG CGGCATGCTG
GCCGCCAGCC TGGGCGCCGG CTTTCTTGGC GGCATCGTGG CCGGTTTCGT CGCCGGCTAT
GGCACCGAGG CGCTCAACCG CTGGCTGAAG CTGCCGCGCA ATCTTGAAGG GCTGAAACCG
GTATTGATCC TGCCGGTGCT CGGCTGCCTG CTGACAGGCC TGGTGATGCT GTATGTGGTT
GGCGCGCCGG TTGCCGCGTT GCTCGCCTCC CTCACGACTT GGCTGCGCGG CATGCAGGGT
GCCAACGCGG TACCGCTGGG CGCGCTGCTG GGCGGCATGA TGGCCTTCGA CATGGGCGGT
CCCATCAACA AGGCTGCGTA TGCCTTCAGC ACGGGGCTGA TCGGCGCACA GGTCTACACG
CCCATGGCGG CCACCATGGC CGCGGGCATG ACGCCGCCGT TGGGCATCGC TCTGGCGGCA
TGGCTGTTCC CGTCGCGATT TACGCGAGAC GAACGCCAGG CGGCGCGCGC CACCGCCGTG
CTCGGCCTCG CCTTCATCAG CGAGGGCGCG ATCCCGTATG CGGCCCGCGA CCCGTTCCGC
GTGATTCCCG CGCTCGTGGC GGGTTCGGCC TGCGCGGGCG CCCTTTCGAT GCTGTTCGGC
GTGGAACTGC GCGTGCCGCA CGGCGGGGCG TTCGTGCTGC CGATTCCGAA TGCGGTGACG
CACCTGGGCG GCTATGTTGC AGCGCTGGTT ACCGGCACCG TCGTCACCGC CGTGCTGCTG
GCAGTGATGA AGCGGCGGGT GGCGGAAGCC GCCTGA
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| Protein sequence | MANLLAILGA DGRTTRAMLA GAALRHAARE SGCKLDVDVR GPDTVSVVDT AALATAEAVV
WAGLVPDAAA RHANPRTLEV TLDEVLADAR AVLARMIGNA PPVPKAGAQA QRIVAITSCP
TGIAHTFMAA EALTQAAGAL GHTIHVETQG SVGAQNTLSA DAIATADLVL IAADTQVDLS
RFAGKRVFRA GTKVAIHDGQ ALIRRAFDEA SLEGAGTAQL AGTAAAAAEQ QRTGPYKHLM
TGVSFMLPFV VAGGILIALA FALGGIYVTD ASASHTLGGV LFQIGAKSAF ALMVPVLAGY
IAYSIASRPG IAPGMVGGML AASLGAGFLG GIVAGFVAGY GTEALNRWLK LPRNLEGLKP
VLILPVLGCL LTGLVMLYVV GAPVAALLAS LTTWLRGMQG ANAVPLGALL GGMMAFDMGG
PINKAAYAFS TGLIGAQVYT PMAATMAAGM TPPLGIALAA WLFPSRFTRD ERQAARATAV
LGLAFISEGA IPYAARDPFR VIPALVAGSA CAGALSMLFG VELRVPHGGA FVLPIPNAVT
HLGGYVAALV TGTVVTAVLL AVMKRRVAEA A
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