| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3105 |
|---|
| Symbol | |
|---|
| ID | 6289315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3244394 |
|---|
| End bp | 3245491 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642626676 |
|---|
| Product | putative zinc protease protein |
|---|
| Protein accession | YP_001900660 |
|---|
| Protein GI | 187930173 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4324] Predicted aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCCG CACGCGCGCT GTACCTTGCG CTGTCGCTTG CCGGTTCGGC GTTGCTGGCC
GGCTGCGACA CCGTCGGTTA TTACTACCAG TCGGTCAGCG GACATCTCTC GCTGATGGCG
CAGCGCGAGT CGATCGACCA GGCGATCGAC AACGCCCGGC AGGCTCACAA CGACAAGCTC
GCCAAGCGGC TCGAAGATGC GCGCAGCATC CGCATCTATG CGTCGCGCGA GCTGGGCCTG
CCGGACAACG GCAGCTATCG CGTCTACGCC AATCTCAAGC GTCCGTTCGC GGTGTGGAAC
GTGTTTGCGG CGCCGGAGCT GTCGGTCAAG CTCAAGGAAT GGTGTTTTCT CGTCGTGGGC
TGCGTGACGT ATCGCGGGTA CTACGATCGC AACGCCGCCA TGGCCTACGC CGACACCTTG
CGCGCCCAAG GCCTCGATGT GGATGTGGCC GGCATTCCTG CGTATTCCAC ACTGGGTTAT
TTCGACGACC CGCTGCTCAA CACCTTCGTC GGCCTGCCCG AAGGTGAGCT GGCGCGGCTG
ATTTTTCATG AGCTGGCGCA CCAGGTCGTC TACGCCAAGG GCGATACCGC GTTCAACGAA
TCGTTTGCCA CCGCCGTGGA AACCATTGGC GTCGAACGCT GGCTGGCGGA TGCCGCCACC
CCGGAAATTC GCGCGGAATA CGCCACGTAC GACGCCCGGC GCGTACAATT CCGCGCCCTG
CTGCTGGAGT ATCGCAACCG ACTTGAGGCG CTGTATGCCA GCCCAGTGTC GGACGACGAG
AAGCGCGCCG GAAAACGCGC CATCTTCGCG AGCCTCCAGG CCGATTACAC CAAGCTCAAA
GCAAGCTGGG GCGGTTATAC CGGTTACGAC CGCTGGTTTG CGCAGCCGCT GTCCAACGCG
CATCTGGGCG CAGTCGCGAG CTACCTGGAA TGGGTGCCGG CGTTCACGGC GCTGTATCAC
CGTGATGGCG GCGACTGGGC GCGCTTTTAT GACGACGTCA AGGCCATGGT GCGGGAGTCC
AAACTGCAGC GGGAGGCAGC ACTCCGATTA CTGGCGCCTT CGGCGATGGG CGCGTCGGAG
GACATCAGAC AAAAGTGA
|
|---|
| Protein sequence | MRAARALYLA LSLAGSALLA GCDTVGYYYQ SVSGHLSLMA QRESIDQAID NARQAHNDKL
AKRLEDARSI RIYASRELGL PDNGSYRVYA NLKRPFAVWN VFAAPELSVK LKEWCFLVVG
CVTYRGYYDR NAAMAYADTL RAQGLDVDVA GIPAYSTLGY FDDPLLNTFV GLPEGELARL
IFHELAHQVV YAKGDTAFNE SFATAVETIG VERWLADAAT PEIRAEYATY DARRVQFRAL
LLEYRNRLEA LYASPVSDDE KRAGKRAIFA SLQADYTKLK ASWGGYTGYD RWFAQPLSNA
HLGAVASYLE WVPAFTALYH RDGGDWARFY DDVKAMVRES KLQREAALRL LAPSAMGASE
DIRQK
|
|---|
| |