Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3088 |
Symbol | murC |
ID | 6286115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3224110 |
End bp | 3225561 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642626659 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_001900643 |
Protein GI | 187930156 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.47524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACA TCGTCAAGAA CATCCATTTT GTAGGCATCG GCGGGGCCGG CATGAGCGGC ATCGCGGAGG TGCTGCTGAA TCTGGGCTAC CGCGTGACGG GCTCGGATCT GGGCAGCAGC GCGACCACGC AGCGTCTGGC AACGCTGGGC GCCACCATCA TGCAGGGCCA CGCGCCGGAA CATGTGATCG GCGCCAATGC CGTGGTGGTC TCCACCGCCG TGCGCGGCGA CAACCCGGAA GTGCTGGCCG CGCGCGCCAA GCGCATCCCC ATCGTGCCGC GTGCGGTGAT GCTGGCCGAG CTGATGCGCC TGAAGCAGGG CATCGCGATT GCCGGCACGC ACGGCAAGAC GACGACGACC AGCCTCGTCG CCTCCGTGCT GGCCGAAGGC GGTCTGGACC CGACGTTCGT GATCGGTGGC CGTCTCAACT CCGCAGGCGC CAACGCGCGC CTCGGCACGG GCGATTTCAT CGTCGCCGAG GCCGACGAAT CCGACGCGTC GTTCCTCAAC CTGTTCCCCG TGATCGAGGT CATCACCAAT ATCGATGCCG ATCACATGGA CACCTACGGG CACGACTTCG CGCGCCTGAA GCAGGCGTTC ATCGAGTTCA CGCAGCGGCT GCCGTTCTAC GGCATTGCCG TGCTGTGCGT GGACGACCCG AACGTGCGCG AAATCCTGCC GTTCGTCTCC AAGCCGGTCG TGCGCTACGG GTTTGCCGAA GATGCGCAAG TGCGTGCCGT CAATGCGCGC GCTGTCGATG GCCGCATGGA ATTCACCGTG ATCCGCCAGC TCAACGGCCA TGCCGAGCCG CCGCTGTCGA TCACGCTCAA CCTGCCGGGC CTGCACAACG TGCAGAACGC GCTGGCCGCC ATCGCCATCG CCACCGAACT GGAAGTGCCG GACGAAGCCA TCGTCAAGGC GCTGGCCGAG TTCAACGGCG TGGGCCGCCG CTTCCAGCGC TACGGCGAAG TGCCGACCGC TGACGGCAAA GGCCACTTCA CGCTCATCGA CGACTACGGC CACCACCCTG TCGAAATGGC GGCAACGCTG GCTGCTGCGC GCGGTGCGTT CCCCGATCGC CGCCTCGTGC TGTCGTTCCA GCCGCACCGC TTCACGCGCA CGCGCGATTG TTTCGAAGAC TTTGTGAAAG TGCTCGGCAC GGTCGACGCG CTGCTGCTGG CCGAGGTGTA CGCCGCCGGC GAGCCACCCA TCATCGCCGC TGACGGTCGC GCGCTGACGC GTGCGCTGCG CGTGGCCAAC AAGATCGAGC CCGTATTCGT GGAGCAGATC GAAGACATGC CGCAAGCGAT CCTGGATGCG GCGCAGGACG GCGACGTGGT CATCACCATG GGCGCTGGGT CGATCGGGCA GGTGCCCGGG CAAGTGGTTG CGTTGCAGGC GCAGGCGCGC ACTGCAAACG TCGTGGATCT GAACGGAGGC GCCGCAGCAT GA
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Protein sequence | MKHIVKNIHF VGIGGAGMSG IAEVLLNLGY RVTGSDLGSS ATTQRLATLG ATIMQGHAPE HVIGANAVVV STAVRGDNPE VLAARAKRIP IVPRAVMLAE LMRLKQGIAI AGTHGKTTTT SLVASVLAEG GLDPTFVIGG RLNSAGANAR LGTGDFIVAE ADESDASFLN LFPVIEVITN IDADHMDTYG HDFARLKQAF IEFTQRLPFY GIAVLCVDDP NVREILPFVS KPVVRYGFAE DAQVRAVNAR AVDGRMEFTV IRQLNGHAEP PLSITLNLPG LHNVQNALAA IAIATELEVP DEAIVKALAE FNGVGRRFQR YGEVPTADGK GHFTLIDDYG HHPVEMAATL AAARGAFPDR RLVLSFQPHR FTRTRDCFED FVKVLGTVDA LLLAEVYAAG EPPIIAADGR ALTRALRVAN KIEPVFVEQI EDMPQAILDA AQDGDVVITM GAGSIGQVPG QVVALQAQAR TANVVDLNGG AAA
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