Gene Rpic_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3078 
SymbolargJ 
ID6288849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3211580 
End bp3212809 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content67% 
IMG OID642626649 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionYP_001900633 
Protein GI187930146 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTGA ATCTCGTCGC GCCCGCCGCT GATACCCTGT TGCCGATCGA CGGCGTGGAC 
CTCGGCTGGG CCGAGGCCGG TGTGCGCAAG GCCAATCGCA AGGACGTGCT GCTGGTTCGT
ATCGCCGAGG GCTCGACGGT AGCCGGTGTG TTTACGCAGA ACCGTTTCTG CGCGGCGCCT
GTGCAGGTAT GCCGTGAGCA TCTGGCGAGC GGCAAGGGCG CACGCGCGAT CGTCGTCAAC
ACGGGTAACG CGAATGCCGG TACGGGCGCG TCTGGCCTTG CGCATGCGCG TCAGACCTGC
GATGCCGTGG CCAAGCTGCT GGGCGTGTCG GCGGAACAGG TGCTGCCGTT CTCGACGGGC
GTGATTCTGG AGCCGCTGCC GGTCGACCGC ATCATCGCCG GACTGCCCGC TGCTGAGGCG
AACGCCAAGC CGGACAACTG GCTGGCTGCC GCCGAGGCGA TTATGACCAC CGACACCGTA
CCCAAGGCAG CGTCGGCCAC GTGCACGCTG TCGGGCAAAA CCGTGCGCAT GTCCGGCATC
AGCAAGGGTG CAGGCATGAT CCGTCCGAAC ATGGCGACGA TGCTCGGCTT CATCGCCACC
GATGCCGATG TGGATGAAGC CGTGCTTCAA GGTCTGGTGC GCCACGCCGC CGATCACTCG
TTCAACAGCG TGACGGTGGA CGGCGATACC TCCACCAACG ACTCGTTCGT CGTCATCGCG
ACGGGCCGGG CTGGCACGCC GCGCATCGAT TCCGAGTCGC ACCCCGACTA CGCTGCGCTG
CGCGATGCGC TGACGGGCCT CGCACAAGAG CTGGCGCAGA AGATCGTGCG CGATGGCGAG
GGCGCGACCA AGTTCATGGC CATCCAGGTT GAGGGCGGCC GCAACGTCGA AGAGTGCCGC
CTCATCGCCT ATGCGGTCGC GCACTCGCCG CTGGTCAAGA CCGCGTTCTA CGCTTCGGAC
CCCAACCTGG GGCGCATCCT GGCCGCTGTG GGCTACGCCG GCGTGACGGA CCTCGACGTG
AACGGCGTCA ACCTGTGGCT CGACGACGTG TGGGTCGCGC GAGACGGCGG CCGCAACCCC
GAGTACCGCG AAGAAGACGG CCAGCGCGTG ATGAAGCAGG CGGAGATTAC CGTGCGCATC
GCGCTCGGCC GCGGCGACGC CACCGCCACC GTGTGGACGT GCGACTTCTC GCACGACTAC
GTGTCGATCA ACGCCGACTA CCGTTCGTGA
 
Protein sequence
MAVNLVAPAA DTLLPIDGVD LGWAEAGVRK ANRKDVLLVR IAEGSTVAGV FTQNRFCAAP 
VQVCREHLAS GKGARAIVVN TGNANAGTGA SGLAHARQTC DAVAKLLGVS AEQVLPFSTG
VILEPLPVDR IIAGLPAAEA NAKPDNWLAA AEAIMTTDTV PKAASATCTL SGKTVRMSGI
SKGAGMIRPN MATMLGFIAT DADVDEAVLQ GLVRHAADHS FNSVTVDGDT STNDSFVVIA
TGRAGTPRID SESHPDYAAL RDALTGLAQE LAQKIVRDGE GATKFMAIQV EGGRNVEECR
LIAYAVAHSP LVKTAFYASD PNLGRILAAV GYAGVTDLDV NGVNLWLDDV WVARDGGRNP
EYREEDGQRV MKQAEITVRI ALGRGDATAT VWTCDFSHDY VSINADYRS