Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3072 |
Symbol | |
ID | 6286996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3207632 |
End bp | 3208513 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642626643 |
Product | Prepilin peptidase |
Protein accession | YP_001900627 |
Protein GI | 187930140 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.373458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGA TGTTCGTCAT CCCCACGTTG GCGCAACTGC CGGCGTGGTT TGTAGTTGCC GCAGGCGGGC TGGTCGGCTT GCTGGTCGGC AGCTTCCTGA ACGTGGTGAT CCACCGTCTG CCGCGCATGA TCGAGCGGGA GGAAGCCAAC TACATCGCAG AACTGCGTGA TGAGCCGCTG CCTCACCCCG ACGCATACAA CCTGGTCGTG CCGCGCTCGG CGTGCCCGTC GTGTGGTCAT CAGATCAAAG CGATCGAGAA CATCCCCGTG TTGAGCTGGC TTGCGCTGCA CGGCCGGTGC AGTGCCTGCA AGGCGCCCAT CTCGTGGCGC TATCCCGCTG TGGAACTGGT CACTGGTCTG CTGACCGCGG CCTGCCTGTG GCACTTCGGC CCGACGTGGG TGGCGGTCGC ATCGGCGGTC CTGCTGTGGT TCCTGATCGC CGGCACCATG ATCGACGCCG ATACGCAACT GTTGCCCGAT GCCATCACCC AGCCGCTGCT GTGGCTCGGG CTGGGCGTGA ACCTGTTCGG CATGTTTGCG CACTTGCAGG ACGCGGTCGT CGGCGCGATG GCCGGTTACC TGTTCCTGTG GTCGATCTAT TGGGCCTACA AGCTGCTGCG CGGCCGCGAA GGCATGGGCT ACGGCGACTT CAAGCTGATG GCCGCACTCG GCGCGTGGTT CGGCTGGCAG GCGCTGCCGT TGCTGGTGCT GCTCTCGTCC GTCGTGGGAC TGGTGTTTGG GCTCGTGCGC ATTGCGCGCG GCGCGACGAG CGAATCGCCG TTCTCGTTCG GACCGTTCAT TGCCGGGGCC GGCGTGATCG CATTGCTGGC CGGCCCGCAG CTGCTCATGA TGGCAGGCCT AGGCCCGCTC CTTGCGCCAT AA
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Protein sequence | MPEMFVIPTL AQLPAWFVVA AGGLVGLLVG SFLNVVIHRL PRMIEREEAN YIAELRDEPL PHPDAYNLVV PRSACPSCGH QIKAIENIPV LSWLALHGRC SACKAPISWR YPAVELVTGL LTAACLWHFG PTWVAVASAV LLWFLIAGTM IDADTQLLPD AITQPLLWLG LGVNLFGMFA HLQDAVVGAM AGYLFLWSIY WAYKLLRGRE GMGYGDFKLM AALGAWFGWQ ALPLLVLLSS VVGLVFGLVR IARGATSESP FSFGPFIAGA GVIALLAGPQ LLMMAGLGPL LAP
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