Gene Rpic_3037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3037 
Symbol 
ID6286602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3163787 
End bp3164254 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content67% 
IMG OID642626607 
Product17 kDa surface antigen 
Protein accessionYP_001900592 
Protein GI187930105 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA TCTATCGCAT CGGCGCCGCG ACTCTGCTGG TCGCCGTCCT TGGCCTGCAA 
GGCTGCGCCA TGGGCACCAA TTCCAACAGC GCCTACTCCT CTGGTCAGGC GCAGCGCGAG
CAGACCGTGC GCTTCGGTAC GGTAGATTCC GTGCGCAATG TCGTGATCGA CCGTGAGCAG
ACCGGCGTTG GCACGATTGC CGGCGGCGCG ATTGGCGGCA TCGGTTCGGC TGCGGCCATC
GGGCGCGGCA ACGGCTCGGT TGCGGCGGGT GTGCTCGGTG CGATTCTCGG CGGCGTCGCA
GGCAGCGCGC TCGAAGGTCA GATGAACAAG CGGCCGGGCC TGGAAATCAC CGTCAAGCTC
GACAACGGTG AGTACCGCGC CATCACGCAA GACGCGGACG AGGCGTTCCG CCCTGGCGAG
CGCGTGCGCC TGCTGTCATC GGGCGGCGTG ACGCGCGTCA CGCATTGA
 
Protein sequence
MKPIYRIGAA TLLVAVLGLQ GCAMGTNSNS AYSSGQAQRE QTVRFGTVDS VRNVVIDREQ 
TGVGTIAGGA IGGIGSAAAI GRGNGSVAAG VLGAILGGVA GSALEGQMNK RPGLEITVKL
DNGEYRAITQ DADEAFRPGE RVRLLSSGGV TRVTH