Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3021 |
Symbol | aroE |
ID | 6288656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3148807 |
End bp | 3149724 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642626591 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001900576 |
Protein GI | 187930089 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.332302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCGT CGTTTCAAGA GGCCATCCTC GCCGCCGCGA GCGCGCCGCC CACAGATCGC TATGGCGTGA TCGGCAACCC GATCGCGCAC AGCAAGTCGC CCATCATCCA TGCCGCGTTT GCGCAGCAGA CCGGGCAGCG CATCCGCTAC GACCGTATCT ACGCCGAGTT GATCGCGTTT GACGAAACCG TGATGACCTT CGTGCGTGAA GGCGGACGCG GGCTCAACGT GACGGTGCCG TTCAAGCTCG ATGCGTATGC CATGTCGACG TCGTTGTCGC TGCGGGCGGA ATCGGCCGGC GCGGTCAACA CGCTCAAGTT CGATGGTGAA GAGATTTTTG GCGACAACAC CGACGGCGTC GGCCTGATGC GCGACATCAC CCACAACATC GGCAACGCGC TCGAAGGCGA GCGCGTGCTG CTACTGGGCG CGGGTGGTGC GGCGCGCGGC GTGCTGCTGC CGCTGCTGGA GCACAAGCCC GCGCGCGTGT TCCTGGCCAA CCGCACGGCC GATCGCGCCA ACAGGCTGGT CGAGCGCTTC GAGGTCTCGG CCAAGCTGCA CGAGGTTGAA CTCGTGGGCG GGGGCTATGA CGAGCTTGCT GCGGACGACG TTTTCGACGT CATCATCAAC GCCACGGCGA GCAGCCTGCA GGCCGAAGTG CCGCCGATCC CGACCACCGT GTTCGGCCCC AACGCGCTGG CCTACGACAT GATGTACGGC CCGCGTCCGA CGGTGTTCAT GGAGTTCGCC CGGCGCAACG GCGCCCGCGC ATGGGACGGC CTGGGCATGC TGGTGGAGCA GGCCGCGGAA TCGTTCTTCG TCTGGCGCGG CGTGCGCCCG GACACCGCGC CGGTGCTGCT CGCCATGCGC GAAGGGCTGC AGGGCGAAGC CGCGGTCGCG GCGCGCGCGC CTCGCTGA
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Protein sequence | MPSSFQEAIL AAASAPPTDR YGVIGNPIAH SKSPIIHAAF AQQTGQRIRY DRIYAELIAF DETVMTFVRE GGRGLNVTVP FKLDAYAMST SLSLRAESAG AVNTLKFDGE EIFGDNTDGV GLMRDITHNI GNALEGERVL LLGAGGAARG VLLPLLEHKP ARVFLANRTA DRANRLVERF EVSAKLHEVE LVGGGYDELA ADDVFDVIIN ATASSLQAEV PPIPTTVFGP NALAYDMMYG PRPTVFMEFA RRNGARAWDG LGMLVEQAAE SFFVWRGVRP DTAPVLLAMR EGLQGEAAVA ARAPR
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