Gene Rpic_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3009 
SymbolaraG 
ID6286177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3136919 
End bp3138448 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content65% 
IMG OID642626579 
ProductL-arabinose transporter ATP-binding protein 
Protein accessionYP_001900564 
Protein GI187930077 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTCC AATCACTTGA TGAGAGCGGC CCGCCCGACG CTTCCGCTGA CGCCTATCTG 
AAGCTCGACG GCATCACCGT GCGCTTTCCT GGCGTGCTGG CGCTCGACCA TGTCTCGCTC
GACATCCGCC GCGGCGAGGT GCACGGCCTG ATGGGCGAGA ACGGCGCGGG CAAGTCGACG
CTGCTCAAAG TGCTGTCGGG CGTCAACCAG CCGGAGGTTG GCACGCTGTC GCTCGATGGC
GTGCCGCAGC AGTTCACGAA CACGCGCGCG GCCATTACGG CGGGCATCGC GATCATCTAT
CAGGAACTGC ACCTCGTGCC GGAACTGACG GTGGCGGAAA ACCTGATGCT CGGCGCGCTG
CCCAACCGCT TTGGCGTGCT CGACGAGAAG ACGCTGATCA CCCGTGCGCT GCGCGAACTC
GAACGGCTGG GCGAGAAGCT CGATCCGGCG CAACCGGTCA AGCATCTATC GATCGGCCAG
CGCCAGATGA TCGAGATCGG CAAGGCGCTG ATGCGCGACG CGCGCGTGAT CGCGTTCGAC
GAACCAACGA GTTCGCTCTC CTCGCGGGAG ACGGCACAGT TGTTCCGCAT CATCCGCGCG
CTCAAGGCCG AGGGCCGCGC GGTCATCTAC GTCACGCACC GCATGGAAGA GGTGTACGAA
CTGTGCGATC GCGTGACCGT ATTCCGTGAC GGCCGGCACA TTGACACGTT CAACGCCGGG
GCGAGCCTCG ACCGCGAACG GCTGATCCGC TGCATGGTCG GCCGCTCGAT CCAGGACGTG
TACGGCTACA AGCCGCGCCC GCTCGGTGGG GTGAAGATCG ACGTACGCGG CTTGATGGGG
CCAGGCTTGA CTGAACCCGC AACGTTCCGG GCGCATGCAG GAGAAATCGT CGGCTTTTTC
GGGCTGGTCG GCGCGGGACG CTCGGAGCTG ATGAAGCTGC TTTACGGCGC AGTCGGACCC
ACAGCGGGCG AGGTCCGCCT CAACGGCAAG CGCGTCCAGT TCAACACACC GCGCGATGCG
GTGCGCGCGG GTGTTGCGCT CTGCCCGGAA GACCGCAAGC AGGAAGGCAT CGTTGCCATC
GCCTCGGTCT CGGACAACCT GAACATCAGT TGCCGGCGCC ACTTCAGCCG CTTCAGCGTG
CTGAACAACC GGCAGGAAGC GCGGACCACG AAGTCGTTCA TCGACAAGCT CGCCATCAAG
ACACGCAACG GCGAGACGCC CATCGGCAAG CTCTCGGGCG GCAACCAGCA GAAGGTGATC
CTCTCGCGCT GGCTGGCCGA GGACATTGAC GTCTTCCTGA TGGACGAGCC CACACGCGGC
ATCGACGTCG GCGCCCGCAG CGAAATCTAC AGCCTGCTCT ACGGCCTCGC CGAGACGGGC
CGCACCGTCA TCGTGGTGTC GAGCGATCTG GCCGAAGTCA TCGGCGTGGC AGACCGAGTG
CTCGTGATGA AGCAGGGCCG CATCGTCGGC GATCTGCCCC GAGAGCACGC CTCGCCCGAC
ACCCTCATCA AACTAGCGCT GCCGCGCTAG
 
Protein sequence
MTVQSLDESG PPDASADAYL KLDGITVRFP GVLALDHVSL DIRRGEVHGL MGENGAGKST 
LLKVLSGVNQ PEVGTLSLDG VPQQFTNTRA AITAGIAIIY QELHLVPELT VAENLMLGAL
PNRFGVLDEK TLITRALREL ERLGEKLDPA QPVKHLSIGQ RQMIEIGKAL MRDARVIAFD
EPTSSLSSRE TAQLFRIIRA LKAEGRAVIY VTHRMEEVYE LCDRVTVFRD GRHIDTFNAG
ASLDRERLIR CMVGRSIQDV YGYKPRPLGG VKIDVRGLMG PGLTEPATFR AHAGEIVGFF
GLVGAGRSEL MKLLYGAVGP TAGEVRLNGK RVQFNTPRDA VRAGVALCPE DRKQEGIVAI
ASVSDNLNIS CRRHFSRFSV LNNRQEARTT KSFIDKLAIK TRNGETPIGK LSGGNQQKVI
LSRWLAEDID VFLMDEPTRG IDVGARSEIY SLLYGLAETG RTVIVVSSDL AEVIGVADRV
LVMKQGRIVG DLPREHASPD TLIKLALPR