Gene Rpic_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2996 
SymbolaraG 
ID6289471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3122961 
End bp3124496 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content66% 
IMG OID642626566 
ProductL-arabinose transporter ATP-binding protein 
Protein accessionYP_001900551 
Protein GI187930064 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.519724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGT TTCTTGAGTT TCGTGGCATC AGCAAGGTGT TTCCGGGTGT GCGGGCGCTG 
TCCGATGTGT CGTTCGGCAT CGAATGCGGT CGCGTGCACG GCTTGCTGGG CGAGAACGGC
GCGGGCAAGT CGACGCTGTT GAAGATTCTG GGCGGCGACT ATCAGCCCGA TGGCGGGCAG
ATCGTCGTGG AGGGAAAGCC GACGGCGTTC CCGACGACGC GCGCGGCGCT GGATGCCGGT
ATTGCCGTCA TCCATCAGGA ACTGCAGACG GTGCCCGAGC TGACGGTGAT GGACAACCTG
CTGCTGGGCC ACCTGCCGGC CAGCGGCGGG TTCATCCGTC AGCGCGAGGC GATGGCCTGG
ACGCGCGAGC AGCTCGGCCG CATCGGCGTC GATCTGGACC CGCGCGCCAA GCTGAAACAC
CTGTCGATCG GGCAGCGCCA GATGGTCGAG ATCTGCAAGG CGATCCTGCG CGATGCGCGC
GTCATTGCGC TGGACGAGCC GACGAGTTCG CTGTCGATCC GCGAGACCGA CATTCTGTTC
CGCCTTGTGA AAGACCTGCG CGCGCAGGGC CGGGCGCTGA TCTACATCTC GCACCGTCTC
GATGAGATTT TCGAGCTGTG CGATGGCTGC ACGATCTTCC GCGACGGCCG CAAGGTGGCG
GATTTCCCGT CGATGGCCAA CGTCACGCGC GACGAGCTGG TGGCGCAGAT GGTCGGCCGC
CAGATCGACG ACATCTTCGA TTACCGCGCG CGCCCGCTTG GCGACGTGCG CTTGCAGGTG
GATGGCCTGA TGGGCCCGAA GCTGGCTGAA CCGGCAAGCC TGTTCGTACG CCGCGGCGAG
ATCGTCGGCC TGTTCGGGCT GGTGGGCGCG GGGCGTTCGG AACTCGCGCG ATTGATTTAC
GGCGCTGATC GCAAGACGGC GGGCAGTCTT ACGCTCGACG GCGCGCCAAT CCGCATCCGC
GACGTGGCCG ACGCCATCCG CCAAGGCATC GTGCTGTGCC CGGAAGACCG CAAGGAAGAA
GGCATCATCG GCTGCCGCTC GGTGTCGGAA AACATCAACA TCAGTTGCCG GCGCAACCAG
CGTCGCTTCG GCCTGTTCGT CAACGACAAG CAGGAAGCGA AGACGGCCGA CCACTACATC
ACGCGCCTGC GCATCAAGAC ACCCAACCGC GAGCAGCCGA TCCGCCTGCT GTCGGGCGGC
AACCAGCAGA AGGCGATCCT GGCCCGCTGG CTGGCGGAAG ACGACATGCG CGTGCTCATC
ATCGACGAGC CGACGCGCGG CATCGACGTT GGCGCCAAGA ACGAGATTTA CCAGGTGCTG
TACGAGCTGG CCGAACGCGG CGTGGCCGTG CTGATGATTT CCAGCGAGCT GCCGGAAATT
CTGGGTGTGG CCGATCGCGT GCTCGTGATG AGCGAAGGCC GCATCGCCGG CGAACTGCCG
CGCGAACAGG CCAACGAGCA AGCCGTGCTC AAGCTCGCAC TGCGACCTGA ATCTGCGCCG
CTGCCATCTG CACCGCAGCC GCCGCTGGCT GCCTGA
 
Protein sequence
MSAFLEFRGI SKVFPGVRAL SDVSFGIECG RVHGLLGENG AGKSTLLKIL GGDYQPDGGQ 
IVVEGKPTAF PTTRAALDAG IAVIHQELQT VPELTVMDNL LLGHLPASGG FIRQREAMAW
TREQLGRIGV DLDPRAKLKH LSIGQRQMVE ICKAILRDAR VIALDEPTSS LSIRETDILF
RLVKDLRAQG RALIYISHRL DEIFELCDGC TIFRDGRKVA DFPSMANVTR DELVAQMVGR
QIDDIFDYRA RPLGDVRLQV DGLMGPKLAE PASLFVRRGE IVGLFGLVGA GRSELARLIY
GADRKTAGSL TLDGAPIRIR DVADAIRQGI VLCPEDRKEE GIIGCRSVSE NINISCRRNQ
RRFGLFVNDK QEAKTADHYI TRLRIKTPNR EQPIRLLSGG NQQKAILARW LAEDDMRVLI
IDEPTRGIDV GAKNEIYQVL YELAERGVAV LMISSELPEI LGVADRVLVM SEGRIAGELP
REQANEQAVL KLALRPESAP LPSAPQPPLA A