| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2994 |
|---|
| Symbol | |
|---|
| ID | 6289618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3121011 |
|---|
| End bp | 3121925 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642626564 |
|---|
| Product | SMP-30/Gluconolaconase/LRE domain protein |
|---|
| Protein accession | YP_001900549 |
|---|
| Protein GI | 187930062 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3386] Gluconolactonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.412095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG CAACCACGCT GTCCGATCTG CGCTGTACGC TGGGCGAAGG CATTGTCTGG
GACAACGCCC TGCGCGTGCT CTGGTGGACC GACATCCAGG AATCGCTGCT GTGGCAGCAC
GATCCGGCGA CGGGGCAGGA GCGCCAATGG CCGCTGCCAC AACGCGTGGG TTCTTTCGTG
CTGACGGACG AGCCAGGCGT GCTGATCCTG GGCCTTGCCA AAAACATCGC CCGCTTCGAC
ACGCGTACCG GCGCGCTCAC GCTGCTGGCC GACGTCGAGC CCGACAACCC GACCACGCGC
GTCAATGACG GCCGTGCCGA CCGCTCCGGA AACTACGTCT TCGGCACCAT GCACGAAGGC
GGCCCGGAAC CGACCGGCAG CTTCTATCGC TTCACGCCCG TGGGCACGCT GCAACGCCTT
GCGCTGCCGC ACATCGCCAT CGCCAATAGC ATCGCCTTCA GTCCCGACGG CGCGACCCTG
TATTGGTGCG ATACGAGCAG CCGGCGCATC CACGCGTGCG ATTACGAGGG GCAGACGGGC
CAAGTCGCCA ATATTCGCGT CTTCGCCGAT CTGCGCGGCC AGGATGCGGA TGGCGCGCAC
AAAGGCTCAC CCGATGGCTC CACCGTCGAC GCAGACGGCT GCCTGTGGAA TGCAGAGTGG
GGCGGCAACC GGCTGACGCG CTACGCGCCA GACGGGCGCG TGCTGGCGCG CGTTTCCGTG
CCGGCATCGC AGCCGACATG TCCGGCATTT GGCGGCGAGG CGCTCGACAC GCTGTATCTG
ACGACGGCGC GCGATGGCTT GTCGGCGCGC CGCTTGGCGG AAGACGTGAA TGCCGGCGCG
ACGTTCCGGC TTGCCGTGCC GGACGTACGC GGATTGCCGG AGGGCCGCTT CGGCCATGCC
TACGTTGCAG CTTGA
|
|---|
| Protein sequence | MTTATTLSDL RCTLGEGIVW DNALRVLWWT DIQESLLWQH DPATGQERQW PLPQRVGSFV
LTDEPGVLIL GLAKNIARFD TRTGALTLLA DVEPDNPTTR VNDGRADRSG NYVFGTMHEG
GPEPTGSFYR FTPVGTLQRL ALPHIAIANS IAFSPDGATL YWCDTSSRRI HACDYEGQTG
QVANIRVFAD LRGQDADGAH KGSPDGSTVD ADGCLWNAEW GGNRLTRYAP DGRVLARVSV
PASQPTCPAF GGEALDTLYL TTARDGLSAR RLAEDVNAGA TFRLAVPDVR GLPEGRFGHA
YVAA
|
|---|
| |