Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2992 |
Symbol | |
ID | 6289616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3119340 |
End bp | 3120149 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642626562 |
Product | short chain dehydrogenase |
Protein accession | YP_001900547 |
Protein GI | 187930060 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTT CTCCGATGTC TTTTCCGCCG CGTCTCGCAG GCAAAGTCGC CCTGGTGACG GGCGCCACGC AAGGCATTGG CGGTGCGATC GCCAAGCTGT TCGTGCAGCA CGGCGCACGC GTGATCGTCA ACGCGCTGGT GCGTGACGCG CGCGCCGAAG CCTTTGCCGC CGAAATTGGC AACAGCGTTG GCAACGACGA CAACATCCTC CTCGTGCAAG CCGACGTGCG CGACCGTGCG CAGATCGACG CGATGGTCGC TGCCGGCGTC GAGCGCTTTG GCGGCATCGA CGTGCTGGTC AATAACGCCG GCATCAACGT GTTTTCCGAT CCGCTCAAGT TGAGCGAGGG CGACTGGGCG CGCTGCCTTT CCGTCGATCT GGAAGGCGCG TGGCAGTGCG CGCGCGCCGT GCTGCCGCAC ATGCTGGCGC GCGGGGCGGG CAGCATCGTC AACATTGCCT CGGTGCATGG GCACAAGATC ATTCCCGGCG CGTTTCCGTA TCCGGTGGCC AAGCATGGGC TGATCGGGCT CACGCGGGCG CTGGGCATCG AATATGCGGC GCGCGGTATC CGCGTCAATT CGATCTCGCC GGGACTGATC CTCACGCCGA TTGCCGAGGC CGGCTTTGCC GCCGCGCCTG ACCCCGAAGC CGAACGCCGC CGCCAAGCCG AGCTGCTGCC GTGCAAGCGC ATCGGCGAGC CCGAAGAGGT GGCCTACACC GCGCTGTTCC TCGCTTCCGA CGAGGCGCGT TTCATCAACG CGACCGACAT CCTCATCGAT GGCGGCCGCT CGCAGCTCTA TCAGGAATGA
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Protein sequence | MTASPMSFPP RLAGKVALVT GATQGIGGAI AKLFVQHGAR VIVNALVRDA RAEAFAAEIG NSVGNDDNIL LVQADVRDRA QIDAMVAAGV ERFGGIDVLV NNAGINVFSD PLKLSEGDWA RCLSVDLEGA WQCARAVLPH MLARGAGSIV NIASVHGHKI IPGAFPYPVA KHGLIGLTRA LGIEYAARGI RVNSISPGLI LTPIAEAGFA AAPDPEAERR RQAELLPCKR IGEPEEVAYT ALFLASDEAR FINATDILID GGRSQLYQE
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