| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2967 |
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| Symbol | mnmA |
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| ID | 6286399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3090809 |
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| End bp | 3091921 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642626537 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001900522 |
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| Protein GI | 187930035 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.775442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA AGCGCATCGT CGTCGGGATG TCGGGCGGCG TGGATTCCTC CGTCACTGCC
TGGCTGCTCA AACAGCAGGG CTACGACGTC GTCGGCCTGT TCATGAAGAA CTGGGAAGAT
GATGATGACA GCGAATACTG CTCGACCCGG CAGGACTGGA TCGACGTGGT ATCGGTGGCC
GACCTGATCG GCGTCGACGT GGAAGCCGTC AACTTTGCCG CAGAGTACAA AGACCGCGTG
TTTGCGGACT TCCTGCGCGA GTATTCGGCC GGCCGCACCC CGAATCCCGA CGTGCTGTGC
AACGCCGAGA TTAAGTTCAA GGCCTTCCTC GATCATGCGA TGGCGTTAGG CGCCGACACC
ATCGCGACCG GGCACTACGC CCGCGTGCGA GAGGTCGATG GCCGCTTCGA GCTGCTCAAG
GCGTTCGATC ACACGAAGGA CCAGAGCTAC TTCCTGCACC GGCTGAACCA AGCGCAGCTT
TCGCGCACGC TGTTCCCGCT GGGCGAGATG CCGAAGACGA AAGTGCGTGA AATTGCTGCC
GAGATTGGCC TGCCGAACGC CAAGAAGAAG GACTCGACCG GCATCTGCTT CATCGGCGAG
CGGCCGTTCC GCGATTTCCT CAACCGCTAC CTGCCGACCA AGCCCGGCCC GATCAAGACG
CCGGACGGCA AGACCATCGG CGAGCACATC GGCCTGGCGT TCTACACGCT GGGACAGCGT
AAGGGCATCG GCATCGGCGG CAGCCGCGAC GGCACCGGCG ATGCCTGGTA CGTGGCGCGC
AAGGACATGG CGGCCAACAC GTTGTACGTC GTGCAGGGGC ACGACCACCC GTGGCTGCTG
GCGCATACCG TGCACGCCGA CGATCTAAGC TGGGTTGCCG GCCACGCGCC CGCCGAAGGC
ACGCACCTTG GCGCCAAGAC GCGTTACCGC CAGGCGGATG CGCCTTGCAC GGTCGCACGC
GCGGCAGGCG GCGCACTCAC GCTGACCTTC TCCGAGGCGC AGTGGGCCGT CACGCCAGGC
CAGTCCGCCG TGCTGTACGA CGGCGAGGTC TGCCTCGGCG GCGGCATTAT TTCGGCAGCT
GAGCCGGCAG TCGTCGAAAA GGCGATCGCC TAA
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| Protein sequence | MSKKRIVVGM SGGVDSSVTA WLLKQQGYDV VGLFMKNWED DDDSEYCSTR QDWIDVVSVA
DLIGVDVEAV NFAAEYKDRV FADFLREYSA GRTPNPDVLC NAEIKFKAFL DHAMALGADT
IATGHYARVR EVDGRFELLK AFDHTKDQSY FLHRLNQAQL SRTLFPLGEM PKTKVREIAA
EIGLPNAKKK DSTGICFIGE RPFRDFLNRY LPTKPGPIKT PDGKTIGEHI GLAFYTLGQR
KGIGIGGSRD GTGDAWYVAR KDMAANTLYV VQGHDHPWLL AHTVHADDLS WVAGHAPAEG
THLGAKTRYR QADAPCTVAR AAGGALTLTF SEAQWAVTPG QSAVLYDGEV CLGGGIISAA
EPAVVEKAIA
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