| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2960 |
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| Symbol | secF |
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| ID | 6287551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3083636 |
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| End bp | 3084607 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642626530 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001900515 |
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| Protein GI | 187930028 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTTT TCCGCATCCG CCGCGACATT CCGTTCATGA AGCACGCGTT GATCCTCAAC
GCGCTGTCGT TCCTGACGTT TATCGCCGCT GTCTTCTTCC TGTTCCACAA GGGGCTGCAC
CTGTCGGTGG AGTTCACCGG CGGTACGGTG ATGGAAGTCG CTTACACCCA GGCCGCCGAT
CTGCCGAAGA TCCGCGGCGA CGTTGAGAAG CTCGGCTACG CCGATGCGCA GGTGCAGAAC
TTCGGCACCT CGCGCGACGT GATGATCCGT CTGCCGCTCA AGACCGGCCC GGACGGCAAG
CCCATCGCCT CGGCCGTGCA AAGCCAGCAG GTGATGACAG CCCTGAACGC TGTGAACCCC
GACGCCAAGC TGCAGCGCGT TGAGTTCGTC GGCCCGCAAG TGGGCAAGGA GCTCGCCACC
GACGGCCTGC TGGCGCTCCT GTTCGTTGTG GTCGGCATCG TGATCTACCT GTCGATCCGC
TTCGAATGGA AGTTTGCCGT TGCGGGCGTG ATCGCCAACC TGCACGACGT TGTGATCATC
CTGGGCTTCT TCGCCTTCTT CCAGTGGGAG TTTTCGCTGT CGGTGCTGGC GGGGGTGCTG
GCGGTGCTGG GCTATTCGGT CAACGAATCC GTGGTGATTT TCGACCGGAT CCGCGAAGCC
TTCCGCAAGT ACCGCAAGAT GAACACGCAC GAGGTGATCG ATCACGCGAT TACCAGCACC
ATCTCGCGCA CGATCATCAC CCACGGCTCG ACCGAAATGA TGGTGGTGTC GATGCTGGTG
TTCGGCGGCC CGACGCTGCA CTACTTCGCC CTGGCGCTGA CGATCGGTAT CCTGTTCGGT
ATCTACTCGT CGGTGTTCGT TGCCGCTGCG CTGTGCATGT GGCTCGGCGT CAAGCGTGAA
GACCTGGTCA AGTCCGAGAA GAAGGCCGGT GGCCCGAAAG AAGACGATCC GAACTTCGGC
GCGCAGGTCT GA
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| Protein sequence | MEFFRIRRDI PFMKHALILN ALSFLTFIAA VFFLFHKGLH LSVEFTGGTV MEVAYTQAAD
LPKIRGDVEK LGYADAQVQN FGTSRDVMIR LPLKTGPDGK PIASAVQSQQ VMTALNAVNP
DAKLQRVEFV GPQVGKELAT DGLLALLFVV VGIVIYLSIR FEWKFAVAGV IANLHDVVII
LGFFAFFQWE FSLSVLAGVL AVLGYSVNES VVIFDRIREA FRKYRKMNTH EVIDHAITST
ISRTIITHGS TEMMVVSMLV FGGPTLHYFA LALTIGILFG IYSSVFVAAA LCMWLGVKRE
DLVKSEKKAG GPKEDDPNFG AQV
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