Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2942 |
Symbol | |
ID | 6287031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3058382 |
End bp | 3059989 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642626512 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001900497 |
Protein GI | 187930010 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCGC CAAAAACGGT CACAGCCGCG CCAGACGGGC GGCGCTTTGG AATCGCATCG CCGTTGATCC TGCGTCCCAT CCGGGTCCGG CTGACGCTGG TGTTCGTGAT CTTTTTACTG CTGGTGGTCG GCGTCGGCGC TTTCAGTATC GACCAACTGG CGAGCTTCCA CAGCGTATCT GCGCAGATCA GCGGGCGCTG GCTACAGAAC AGCCGGATTC TGGGCGACCT CAACAACTAC ATCTCGGATT ATCGCGCGGC CGAAGGCGAT TTTCTGATCG CCTCATCACG CGCTGACCTG CGAGCCGCCG ACGAACAGGT CGCCATGCTC GACAAAGCGA TTGCCACGTC CCAGGCCCGC TACGACAAGA TCGAACACGA CAGCGCCGAG CACGAGCTTT ACAGCCAGTT TGTCACCCAA TGGAACACGT ATCGCGAGCT TGCGCGACGG CTGATGATTT CTGCCAAGGC AGGCGACGTA GCGGGTGCTG CGCGGCTCTA TCACGCGGAT TCCAAACACG CATTCGACTT GGCCAACGAC ACCTTGGGCG TGATGACCGA ACGCAGTGTC GCTGGCGCCA CGGCAGAAAC CGAGCGAGAG GCGCAGGCCT ACCACGATGC GCGGCAACTC ATCGTTGGGG CGATCGTTGT GGCGGCATGT CTGGTCGTGC TGGCCGTGAT CTACCTTGTC TTTGCCGTGT CGCGCCCGAT TGCCGTGCTA GTGGATCGCA TGCACCGCGT TGCCAACAAC GATACCCAGA TCGACATCCC AGGCTTGGAC CGCCACGACG AGATTGGCGA CATCGCGCAA GCCGTGGCGC GTTTTCGAGA AAACACAATC GAACTGGGGC GCAGCAAAGA TGTACTGACC GCCCAGGCGG CCGTATTGCA GGAGACGCTT GACAAAGAGC GCCGCATGGC CGAACTCCAA CGCAATTTCA TCTCAATGGC GTCGCATGAA TTCCGTACGC CACTGGGCGT GATTGACGGC CAGGCCCAGC GGTTGATACG CACGCGTGAT GCGTTGCAGC CCGAGGCGCT CGAAGAACGC TGCGGGAAAA TCCGGGCGGC CGTGCAGCGC ATGACGCACC TGATGGATCA CTTGCTCGAC TCTTCGCAGT GGCTGGATTC CACGACGCCA GCAGCGATGC GGCGCACCGA TTTCCCGCTT GCAGCGCTTC TGCACGAGGT TTGCGAAATG CACTTGGAAG GCACGCCGAG CGCTCGGATC GAGGTGTGCA TAGAGACGGA TGAGCCGAAC ACATTCTTCG GCGATGCCCG GCTCTTATTC CAGGCCTTCA GCAATCTTGT CGGCAACGCC GTTAAGTATT CGCCGCCAGG CGCACCGGTC AGTGTGCGTA TGCGCAGCGA TGCCGACGGT GTGTCGGTAA CTGTGGAAGA CCGGGGCCTG GGCATACCAG AGCGCGATAT CGAGCGCTTG TTCGAGCGCT ACGTGCGCGG CGGCAACGTT GCAGGGACGG TTGGAGCAGG TGTCGGGCTT TACTTGGTGA AGCTGGTCGT GGAACTGCAC CGAGGAACGA TCACTGTGAC CAGCGAAGAA GGCAAAGGCT CAAGATTCAA CGTGTTCTTA CCGCGACTGA ACGGCTAG
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Protein sequence | MQSPKTVTAA PDGRRFGIAS PLILRPIRVR LTLVFVIFLL LVVGVGAFSI DQLASFHSVS AQISGRWLQN SRILGDLNNY ISDYRAAEGD FLIASSRADL RAADEQVAML DKAIATSQAR YDKIEHDSAE HELYSQFVTQ WNTYRELARR LMISAKAGDV AGAARLYHAD SKHAFDLAND TLGVMTERSV AGATAETERE AQAYHDARQL IVGAIVVAAC LVVLAVIYLV FAVSRPIAVL VDRMHRVANN DTQIDIPGLD RHDEIGDIAQ AVARFRENTI ELGRSKDVLT AQAAVLQETL DKERRMAELQ RNFISMASHE FRTPLGVIDG QAQRLIRTRD ALQPEALEER CGKIRAAVQR MTHLMDHLLD SSQWLDSTTP AAMRRTDFPL AALLHEVCEM HLEGTPSARI EVCIETDEPN TFFGDARLLF QAFSNLVGNA VKYSPPGAPV SVRMRSDADG VSVTVEDRGL GIPERDIERL FERYVRGGNV AGTVGAGVGL YLVKLVVELH RGTITVTSEE GKGSRFNVFL PRLNG
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