Gene Rpic_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2942 
Symbol 
ID6287031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3058382 
End bp3059989 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content61% 
IMG OID642626512 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001900497 
Protein GI187930010 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCGC CAAAAACGGT CACAGCCGCG CCAGACGGGC GGCGCTTTGG AATCGCATCG 
CCGTTGATCC TGCGTCCCAT CCGGGTCCGG CTGACGCTGG TGTTCGTGAT CTTTTTACTG
CTGGTGGTCG GCGTCGGCGC TTTCAGTATC GACCAACTGG CGAGCTTCCA CAGCGTATCT
GCGCAGATCA GCGGGCGCTG GCTACAGAAC AGCCGGATTC TGGGCGACCT CAACAACTAC
ATCTCGGATT ATCGCGCGGC CGAAGGCGAT TTTCTGATCG CCTCATCACG CGCTGACCTG
CGAGCCGCCG ACGAACAGGT CGCCATGCTC GACAAAGCGA TTGCCACGTC CCAGGCCCGC
TACGACAAGA TCGAACACGA CAGCGCCGAG CACGAGCTTT ACAGCCAGTT TGTCACCCAA
TGGAACACGT ATCGCGAGCT TGCGCGACGG CTGATGATTT CTGCCAAGGC AGGCGACGTA
GCGGGTGCTG CGCGGCTCTA TCACGCGGAT TCCAAACACG CATTCGACTT GGCCAACGAC
ACCTTGGGCG TGATGACCGA ACGCAGTGTC GCTGGCGCCA CGGCAGAAAC CGAGCGAGAG
GCGCAGGCCT ACCACGATGC GCGGCAACTC ATCGTTGGGG CGATCGTTGT GGCGGCATGT
CTGGTCGTGC TGGCCGTGAT CTACCTTGTC TTTGCCGTGT CGCGCCCGAT TGCCGTGCTA
GTGGATCGCA TGCACCGCGT TGCCAACAAC GATACCCAGA TCGACATCCC AGGCTTGGAC
CGCCACGACG AGATTGGCGA CATCGCGCAA GCCGTGGCGC GTTTTCGAGA AAACACAATC
GAACTGGGGC GCAGCAAAGA TGTACTGACC GCCCAGGCGG CCGTATTGCA GGAGACGCTT
GACAAAGAGC GCCGCATGGC CGAACTCCAA CGCAATTTCA TCTCAATGGC GTCGCATGAA
TTCCGTACGC CACTGGGCGT GATTGACGGC CAGGCCCAGC GGTTGATACG CACGCGTGAT
GCGTTGCAGC CCGAGGCGCT CGAAGAACGC TGCGGGAAAA TCCGGGCGGC CGTGCAGCGC
ATGACGCACC TGATGGATCA CTTGCTCGAC TCTTCGCAGT GGCTGGATTC CACGACGCCA
GCAGCGATGC GGCGCACCGA TTTCCCGCTT GCAGCGCTTC TGCACGAGGT TTGCGAAATG
CACTTGGAAG GCACGCCGAG CGCTCGGATC GAGGTGTGCA TAGAGACGGA TGAGCCGAAC
ACATTCTTCG GCGATGCCCG GCTCTTATTC CAGGCCTTCA GCAATCTTGT CGGCAACGCC
GTTAAGTATT CGCCGCCAGG CGCACCGGTC AGTGTGCGTA TGCGCAGCGA TGCCGACGGT
GTGTCGGTAA CTGTGGAAGA CCGGGGCCTG GGCATACCAG AGCGCGATAT CGAGCGCTTG
TTCGAGCGCT ACGTGCGCGG CGGCAACGTT GCAGGGACGG TTGGAGCAGG TGTCGGGCTT
TACTTGGTGA AGCTGGTCGT GGAACTGCAC CGAGGAACGA TCACTGTGAC CAGCGAAGAA
GGCAAAGGCT CAAGATTCAA CGTGTTCTTA CCGCGACTGA ACGGCTAG
 
Protein sequence
MQSPKTVTAA PDGRRFGIAS PLILRPIRVR LTLVFVIFLL LVVGVGAFSI DQLASFHSVS 
AQISGRWLQN SRILGDLNNY ISDYRAAEGD FLIASSRADL RAADEQVAML DKAIATSQAR
YDKIEHDSAE HELYSQFVTQ WNTYRELARR LMISAKAGDV AGAARLYHAD SKHAFDLAND
TLGVMTERSV AGATAETERE AQAYHDARQL IVGAIVVAAC LVVLAVIYLV FAVSRPIAVL
VDRMHRVANN DTQIDIPGLD RHDEIGDIAQ AVARFRENTI ELGRSKDVLT AQAAVLQETL
DKERRMAELQ RNFISMASHE FRTPLGVIDG QAQRLIRTRD ALQPEALEER CGKIRAAVQR
MTHLMDHLLD SSQWLDSTTP AAMRRTDFPL AALLHEVCEM HLEGTPSARI EVCIETDEPN
TFFGDARLLF QAFSNLVGNA VKYSPPGAPV SVRMRSDADG VSVTVEDRGL GIPERDIERL
FERYVRGGNV AGTVGAGVGL YLVKLVVELH RGTITVTSEE GKGSRFNVFL PRLNG