Gene Rpic_2896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2896 
Symbol 
ID6286089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3008834 
End bp3010297 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content66% 
IMG OID642626466 
Productpeptidase U62 modulator of DNA gyrase 
Protein accessionYP_001900451 
Protein GI187929964 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAG GCGACATCGC CATCCAGAAT CTGTCCATCG CGCGCCGCGT GCTGCTCGAT 
CCGTACGGCC TTGATGAAGC GCATCTGCAG CGCGCGCTGG CCGACATCTT CACGCACCGC
GTGAACTATG CCGATCTGTA CTTCCAGTAC ACCCGCAACG AGGCATGGAG CCTGGAAGAA
GGCATCGTCA AATCCGGCAG CTTCAGCATC GACCAGGGTG TGGGCGTACG CGCCGTCTCG
GGCGACCGCA CCGCGTTTGC GTATTCCGAC GACATCAGCC TGCCCGCGCT GATGCAGGCT
GCCGGTGCCA CGCGCACCAT CGGCAAAGCT GGCGCCGGCC GCGTGAAGGT GGCGGGCAGC
CTTGCCAGCA CCCCGGGCAG CCACTCGCTC TATGCACCGA ACGACCCGCT CGATTCGATG
ACGGCCTCCG AAAAGGTTGC CCTGCTCGAG CGGATCGAAA AGCTCGCCCG CGCCAAAGAC
CCGCGCGTGG TGCAGGTGAT GGCCGGCCTG GCCGGTGAAT ACGACGTGAT GCTCGTTGCG
CGCAGCGACG GCGTGATCGC CGCGGATGTG CGCCCGCTGG TGCGCATTTC CGTCACCGTC
ATCGCCGAGC AGAACGGGCG CCGTGAAATG GGTAGCTCCG GCGGCGGCGG CCGCTATGCC
TATGGCTACT TCACCGACGA ACTGCTGCGC GAATACGTGG ACGAGGCGGT CTCTTCCGCG
CTCGTCAACC TGGAAGCCAA GCCGGCACCG GCCGGCACGA TGACGGTGGT GCTCGGCCCG
GGCTGGCCCG GCGTGCTGCT GCACGAGGCC ATCGGCCACG GGCTCGAAGG CGACTTCAAC
CGCAAGGGCT CGTCGGCGTT TTCCGGCCGC ATGGGCGAAC GCGTGGCGGC CAAGGGCGTC
ACCGTGGTCG ACGACGGCAC GCTGGCCAAC CGCCGCGGCT CCCTGAACCT CGATGACGAA
GGCAACCCCA CGCAGTGCAA CACGCTCATC GAAGACGGCA TCCTCACCGG CTACATGCAG
GACACGCTCA ACGCGCGCCT GATGAAGATG CCCGTGACCG GCAACGCGCG CCGCGAGAGC
TACGCCGCCC TGCCGATGCC GCGCATGACC AACACCTACA TGCTGGGCGG CGACAAGGAT
CCGCAAGAGA TCATCGCGAG CGTCAAGAAG GGCCTGTATG CTGTCAACTT TGGCGGCGGC
CAGGTCGACA TCACCAACGG CAAGTTCGTG TTCTCGGCCA GCGAGGCCTA CATGATCGAG
GACGGCAAGA TCACCGCTCC GGTCAAGGGC GCGACGCTGG TCGGCAGCGG CCCGGAATCG
CTCAAGCACG TGACCATGAT CGGCAACGAC ATGCGCCTCG ATTCGGGTAT CGGCGTGTGC
GGCAAGGAAG GCCAGAGCGT GCCGGTGGGC GTCGGTCAGC CGACGCTGCG CATGGAGAAC
ATGACGGTGG GCGGCACGGC TTAA
 
Protein sequence
MNAGDIAIQN LSIARRVLLD PYGLDEAHLQ RALADIFTHR VNYADLYFQY TRNEAWSLEE 
GIVKSGSFSI DQGVGVRAVS GDRTAFAYSD DISLPALMQA AGATRTIGKA GAGRVKVAGS
LASTPGSHSL YAPNDPLDSM TASEKVALLE RIEKLARAKD PRVVQVMAGL AGEYDVMLVA
RSDGVIAADV RPLVRISVTV IAEQNGRREM GSSGGGGRYA YGYFTDELLR EYVDEAVSSA
LVNLEAKPAP AGTMTVVLGP GWPGVLLHEA IGHGLEGDFN RKGSSAFSGR MGERVAAKGV
TVVDDGTLAN RRGSLNLDDE GNPTQCNTLI EDGILTGYMQ DTLNARLMKM PVTGNARRES
YAALPMPRMT NTYMLGGDKD PQEIIASVKK GLYAVNFGGG QVDITNGKFV FSASEAYMIE
DGKITAPVKG ATLVGSGPES LKHVTMIGND MRLDSGIGVC GKEGQSVPVG VGQPTLRMEN
MTVGGTA