Gene Rpic_2885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2885 
Symbol 
ID6288877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2990284 
End bp2991348 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content66% 
IMG OID642626455 
Producttaurine ABC transporter, periplasmic binding protein 
Protein accessionYP_001900440 
Protein GI187929953 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4521] ABC-type taurine transport system, periplasmic component 
TIGRFAM ID[TIGR01729] taurine ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTT CTTCCCTCTC TCGCTTGCTG GCTGCAGCGA TGTCTGCGGC CATTTCGTTC 
GCCTTGTTTG GGGCTGCTCC TGCACGCGCG GCCGACCGCG AGGTTGTTAT CGCTTATCAG
GACATGGTGC TGCCCTGGCG CTACGCCCAA GCCACGGGCG AGGTCGAGCG TGCCACCGGC
TATAAGGTGA CGTACCGCCA GCTCGCCAGC GGTGCCGACG TGGTGCGCGC CATCGCCTCG
GGTTCCGTGC AGGTCGGCGA AGCGGGCTCC AGCCCGATTG CTGCCGGCGT GTCGCAGGGC
GTGGACCTGT CGCTGTTCTG GATTCTCGAC AACATCAACG ATGCGGAAGC GCTGGTTGCC
CGCAACGGCA GCGGCGTGTC GCGGGTGGCC GACCTGAAGG GCAAGACCTT GGGCGTGCCG
TATGTGTCGA CCTCGCATTT CCATGCGCTG GTCGCGCTGC AACAAGCCGG GCTCGAGCCG
CGCGACGTGA AGGTGGTCAA CCTGCGGCCG CAGGAGTTGG CGGCCGCGTG GGACCGGGGC
GATGTCGATG CGGCCTTTAT CTGGGATCCG GTACTCGCCA AGGTGAAGAA GAACGGCACC
GTGCTGACCA CCTCCGGCAA GATCGCCGCC GCCACCGGCA AGTCGACCTT CGATGGCTTC
GTGGCGGATC GCAAGTTCGC GCGTGACCAT GCCGAGTTCA TCGCCAAGTT TGTCGAAGTG
CTGGCCAAGG CCGATGCCGC CTATCGCAAC AACAAGGCCG CGTGGACGGC GACATCGCCG
CAGGTGGCAG CCGTGGCCAA GACTTCGGGC GCGACGGCGG CGGACGTGCC GGCAAGTCTT
GCGCTGTATG CCTTCCCGGA TGCGGCGGAG CAGGCCTCCA AGCGATGGCT GGGTGGCGGG
GCGGAATCGG GCGCCGCGCA GTCGCTGCTC GCCACAGCAC AGTTCCTGAA GACGCAGGGC
ACGATCCAGG CGGTGCTGCC GGATTACGGT GCGACCATCG ACTCGCGCTT TGTCCAGCGC
GCGGCTGGTA CTTCCAACAA GGCTGTCGCC ACCGCAACGC GATGA
 
Protein sequence
MAGSSLSRLL AAAMSAAISF ALFGAAPARA ADREVVIAYQ DMVLPWRYAQ ATGEVERATG 
YKVTYRQLAS GADVVRAIAS GSVQVGEAGS SPIAAGVSQG VDLSLFWILD NINDAEALVA
RNGSGVSRVA DLKGKTLGVP YVSTSHFHAL VALQQAGLEP RDVKVVNLRP QELAAAWDRG
DVDAAFIWDP VLAKVKKNGT VLTTSGKIAA ATGKSTFDGF VADRKFARDH AEFIAKFVEV
LAKADAAYRN NKAAWTATSP QVAAVAKTSG ATAADVPASL ALYAFPDAAE QASKRWLGGG
AESGAAQSLL ATAQFLKTQG TIQAVLPDYG ATIDSRFVQR AAGTSNKAVA TATR