Gene Rpic_2881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2881 
Symbol 
ID6287226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2986036 
End bp2987754 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content65% 
IMG OID642626451 
Producturocanate hydratase 
Protein accessionYP_001900436 
Protein GI187929949 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2987] Urocanate hydratase 
TIGRFAM ID[TIGR01228] urocanate hydratase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC CGACCCACGC TGCCCACCTG ACCAACGATC CGCGCTACGA CGCCTCGCGC 
GAAATCCGTG CCCCGCGTGG CACCGAGCTG CACTGCAAGA GCTGGCTGAC CGAGGCGGCC
TATCGCATGC TGCAGAACAA CCTCGACCCG GATGTGGCCG AGAACCCCAA GCACCTCGTC
GTCTACGGCG GTATTGGCCG CGCTGCGCGC GACTGGGCCT GCTTTGACAA GATCCTGGAA
ACGCTGCGCG AGCTGAACGA CGACGAATCG CTGCTCGTGC AATCGGGCAA GCCGGTGGGC
GTGTTCAAGA CCCACCCGGA TGCACCGCGC GTCTTGATCG CCAACTCCAA CCTGGTGCCC
AAGTGGGCGA ACTGGGAGCA CTTCAACGAG CTGGATCGCA AGGGCCTGTT CATGTATGGC
CAGATGACTG CCGGCAGTTG GATCTACATC GGTAGCCAGG GCATTGTGCA AGGCACGTAT
GAGACGTTTG CCGAAGCCGG TCGTCAACAT TACGACGGCA AGCTGGCTGG CCGCTGGATT
CTCACGGCGG GCCTGGGCGG CATGGGCGGC GCGCAGCCGC TGGCCGCCAC GCTGGCCGGC
GCCGTGTCGC TGAACATCGA GTGCCAGCAA TCGAGCATCG ATTTCCGCCT GCGTACGCGC
TACCTCGACA AGCAGGCAAA GGACATCGAC GACGCATTCA ACCTGATTCG CCACCATTGC
GAGCGCGGCG AGGCCGTGTC CATCGGTCTG CTCGGCAATG CGGCGGAAAT CTTGCCGGAG
CTGGTCAAGC GTGCCCGCGC CGGCGGCCTG AAGCCGGATC TGGTGACCGA CCAGACCTCG
GCGCATGATC TGGTCAACGG CTACCTGCCG ATTGGCTGGA CGGTCGAGCA ATGGCGTGCT
GCGCAACGCG ACCCGTCGCA GCACGCCCGC CTGACCGACG AGGCCGCCAA GTCGTGCGCC
GTACACGTGC AGGCCATGCT TGACTTCCAG GCCATGGGCA TTCCGACCGT CGACTACGGC
AACAACATCC GCCAGGTCGC GTTCGACCAG GGCGTGAAGA ACGCCTTCGA CTTCCCGGGT
TTCGTGCCGG CCTACATCCG ACCGCTGTTC TGCGAAGGCA AGGGCCCATT CCGCTGGGTG
GCGCTGTCGG GCGATCCGGA AGACATCTAC AAGACCGACG CCAAGATCAA GGAACTCTTC
CCGCACAACA CGCACGTCCA TCGCTGGCTC GACATGGCGC GTGATCGCAT CGCCTTCCAA
GGGTTGCCCG CACGGATCTG CTGGCTCGGC CTGGGCGAGC GTCACCTGGC CGGTCTGGCT
TTCAACGAGA TGGTCAAGAA TGGCGAGCTG AAGGCGCCGA TCGTGATCGG TCGCGATCAC
CTCGACACCG GCTCCGTCGC CAGCCCCAAC CGTGAAACCG AAGCCATGCG CGACGGCACC
GATGCCGTGT CGGACTGGCC GCTGCTCAAC GCGCTGCTCA ACACGGCCGG CGGTGCGACG
TGGGTGTCGC TGCACCACGG AGGCGGTGTC GGCATGGGCT ATTCGCAGCA CTCGGGCGTG
GTGATCGTCG CCGACGGCAC GGACGCTGCG GCCAAGCGTC TGGGTCGTGT GCTCGTCAAC
GATTCCGGCT CGGGCGTCAT GCGCCATGCC GATGCCGGCT ACGAAACCGC CATTGCCTGC
GCCAAGCGCA ACGGTTTGAA CCTGCCGATG ATCGGCTAA
 
Protein sequence
MNAPTHAAHL TNDPRYDASR EIRAPRGTEL HCKSWLTEAA YRMLQNNLDP DVAENPKHLV 
VYGGIGRAAR DWACFDKILE TLRELNDDES LLVQSGKPVG VFKTHPDAPR VLIANSNLVP
KWANWEHFNE LDRKGLFMYG QMTAGSWIYI GSQGIVQGTY ETFAEAGRQH YDGKLAGRWI
LTAGLGGMGG AQPLAATLAG AVSLNIECQQ SSIDFRLRTR YLDKQAKDID DAFNLIRHHC
ERGEAVSIGL LGNAAEILPE LVKRARAGGL KPDLVTDQTS AHDLVNGYLP IGWTVEQWRA
AQRDPSQHAR LTDEAAKSCA VHVQAMLDFQ AMGIPTVDYG NNIRQVAFDQ GVKNAFDFPG
FVPAYIRPLF CEGKGPFRWV ALSGDPEDIY KTDAKIKELF PHNTHVHRWL DMARDRIAFQ
GLPARICWLG LGERHLAGLA FNEMVKNGEL KAPIVIGRDH LDTGSVASPN RETEAMRDGT
DAVSDWPLLN ALLNTAGGAT WVSLHHGGGV GMGYSQHSGV VIVADGTDAA AKRLGRVLVN
DSGSGVMRHA DAGYETAIAC AKRNGLNLPM IG